Geobacillus subterraneus: GS3922_02495
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Entry
GS3922_02495 CDS
T04323
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03030
DNA replication
gsr03430
Mismatch repair
gsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GS3922_02495 (dnaE)
03430 Mismatch repair
GS3922_02495 (dnaE)
03440 Homologous recombination
GS3922_02495 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsr03032
]
GS3922_02495 (dnaE)
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_02495 (dnaE)
Enzymes [BR:
gsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GS3922_02495 (dnaE)
DNA replication proteins [BR:
gsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GS3922_02495 (dnaE)
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GS3922_02495 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AMX82632
UniProt:
A0ABM6A8R6
LinkDB
All DBs
Position
518746..522027
Genome browser
AA seq
1093 aa
AA seq
DB search
MTFVHLHVLSGYSLLQSTATVEALAAKAKQLGYEALALTDRHVLYGAIPFYRECQRHGLR
PIIGMTADVALDGDGVAFPLVLLAANEEGYRHLIEISTAVQMGEEKHIHEVALRRLSGGI
IALTPGPDGRVESLLAAGEIARAKESLLRYRQLFAGRLHIAIRRGERTRAPYEGGLLRLA
EETGVPIVATNDVRYVEREDALAWRCLQAIDRGVPLADMAEEAGRYLAAPDEMARRFADL
PEALANSMKIANQCALHIEFGRRRLPKFPVPDGETADGYLRRLCEQGLARRVPSADARYR
ERLEHELRIIQTMRFSDYFLIVADVLAYARQRGILTGPGRGSAAGSLVAYVLSITDVDPI
QYGLLFERFLNPERVSVPDIDLDFPDDRREDVIRYVVGKYGRDRVAQIITFGTFGAKAAL
RETAKALGVPRREAEQVMALLPNKQGVTISQWQRESAAFRRAFSALPNGERWLAIAQKLE
GLPRHTSIHAAGVVISPEPLMRDVPLQPSHGEWPLTQYAMGALEALGLLKIDFLGLRTLS
LLGEMVRLVERQTGKPFDVRALPLDDEKTYALLGAGDTSGVFQLESGGMKRVLAELRPST
LEEVVAVNALYRPGPMNMIPTYIRRKRGEEAISYLHPDLEPILAPTYGVLIYQEQIMQIA
ARLAGFSLGKADVLRRAVAKKEKALLAEYREEFVAGCAANGYPAPMAEELYRQIVRFADY
GFNRSHAVSYTLLSYAMAYMKAHYPRCFYAVMLSNASGDREKMALYSREASRKGIPILPP
SVNRSGYRFTVEGEAIRAGLAAVKHVGSAAKLIMDERREHGPFADFFDFAVRLLPKGLAR
PALEALISVGAFDELGGERGALLASMEIAIEHVQLMGPYLEAGGLSLKPKYADAPPLSPA
ERRQRENEWLGFAVTPHPAVVCRPLFQAARAVPIAEVHGSPAVVGGCIAELRKTRTKFGD
EMAFITVSDESGEMEAVAFPSVYARAAGELAEGNFVLLAGTMEMRAGRRQLVLRRVERLS
ASALYIHARLADKPRLSALKPLLEQHRGSTPVYLYDEVKRTLLRLPEQYGVALTAPLIDA
LTALFGAGGLAVK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgtccatttgcatgtgttaagcggatacagcttgctgcaaagcacggcgacg
gtcgaggcgcttgcggccaaagcgaaacagctcggctacgaggctttggcgctcacggac
cgccatgtgctgtatggcgccattccgttttaccgggagtgtcagcgccacggccttcgc
ccgatcatcggcatgacggctgatgtcgcccttgacggggatggtgtggcatttccgctc
gtcctgctggcggccaatgaggaaggatatcgccatttaatcgagatcagcacagcggtt
caaatgggggaagaaaagcatattcatgaagtcgccctccgccgtttgagcggcggcatc
attgccctcactccggggccggacggacgggttgaatcgctgcttgccgccggagagatt
gcgcgggcgaaagaatcgctgcttcgctaccggcagctgtttgccggccgtttgcatata
gccatccggcgcggcgagcggacgcgcgctccatacgaaggcgggctgctgcggctggct
gaagagaccggcgttccgatcgttgcgacgaacgatgtccgctacgttgagcgcgaggat
gcactcgcatggcgctgcttgcaggcgattgaccgaggggtgccgcttgcagatatggcg
gaagaggctgggcgttatttggcggcgccagacgagatggcccgccgctttgctgatttg
ccggaggcgcttgccaacagtatgaagatcgccaatcaatgcgcgctccatatcgagttc
ggccgccggcggctgccgaagtttccggtgccggatggagagacggcggatggctatttg
cgccgcttgtgcgaacaagggctcgcccgccgcgtgccatcagctgacgcacgctaccgg
gaacggcttgagcatgagctgcgcatcattcaaacgatgcgttttagcgactattttttg
atcgtcgccgatgtgctcgcctatgcccgtcagcgcggcattttgaccggcccgggccgc
ggctcggcggccgggtcgctcgtcgcctacgttttgtcgatcaccgatgtcgatccgatc
caatacgggctcttgtttgagcggtttttaaacccggaacgggtgtcggtcccggatatt
gatttagatttccccgatgaccgccgcgaagatgtgatccgctatgtcgtcggcaaatac
ggccgtgaccgcgtcgcgcaaatcattacgttcggcacgttcggcgccaaagcggcgctg
cgcgagacggcaaaggcgcttggcgtccccaggcgcgaagcggaacaagttatggcgctg
ctgccgaacaaacaaggcgtgaccatcagccaatggcagcgcgaatccgccgccttccgc
cgcgcgttcagcgccctccctaacggggagcggtggcttgcgatcgcccaaaaactcgaa
gggctgccgcgccatacgtcgatccacgctgctggcgtcgtcatcagcccggagccgctc
atgcgcgatgtgccgctgcagccaagccatggcgagtggccgcttacgcaatacgccatg
ggggcgttagaagcgcttggtctgttgaaaatcgattttctcggcttgcgcacgttgtcg
ctgctcggagagatggtgcgcctcgtcgaacggcagacgggaaagccgtttgacgtgcgt
gcgttgccgcttgatgatgaaaaaacgtatgcgctgcttggcgctggggatacaagcggc
gttttccagcttgagtcaggcggcatgaagcgcgtgcttgccgaactgcgtccgtcgaca
ttggaagaggtcgtcgccgtcaatgcgctgtaccggccggggccaatgaacatgattccc
acttatatccggcgcaagcgcggcgaagaggcgatttcgtatctccatccggaccttgag
ccgattttggccccgacatacggcgttctcatttaccaagaacaaattatgcaaatcgcc
gcccggctcgccgggttttcgctcggcaaagcggatgtgctccggcgggcggtggcgaaa
aaggaaaaagcgctgctcgctgaatatcgggaagaatttgtggccggctgcgcagcgaac
ggctatccggcgccgatggccgaggagttgtaccggcaaatcgtccgcttcgccgattat
ggctttaaccgaagccatgccgtcagctatacgctgttgtcgtatgcgatggcgtacatg
aaagcccattacccgcgttgcttttatgcggtcatgctctcgaacgcgtccggtgatcgg
gaaaaaatggcgctttatagccgtgaggcgtcacgaaaaggcattccgatcctgccgccg
tcggtcaaccggagcggctatcggttcaccgtggaaggggaggcgatccgcgcggggctg
gcggcggtgaagcacgtcggctcggcggcgaagctcatcatggacgaacgaagggagcat
gggccgtttgccgacttttttgattttgccgttcgcctgctgccaaaggggttggcgcgt
ccagcgcttgaggcgctgatttccgtcggcgcgtttgacgagttgggcggggagcggggg
gcacttttggccagcatggagatcgccatcgaacacgtgcaattgatggggccatactta
gaggctggcgggctgtcgctcaaaccgaaatacgcggatgcaccgccgctttcccctgcc
gagcggcggcagcgggaaaacgaatggctcggcttcgctgtcaccccgcacccggccgtc
gtctgccgcccgctgtttcaagcggctcgggcggtgcccatagcggaagtgcacggttcg
ccggccgttgtcggcggctgcatcgccgagctgcggaaaacgagaacgaagttcggggat
gaaatggcgtttatcacggtcagcgatgaaagcggagaaatggaggcggtcgcttttccg
tccgtctatgcccgcgcggctggcgaacttgcggaagggaattttgtgctgctcgcggga
acgatggagatgcgcgccggacggcggcagctcgttctccgccgggtggaacgtctgtcg
gcgtcggcgctgtatattcatgcgcggcttgctgacaaaccgcggctttccgcgctcaag
ccgctgcttgaacagcatcgcggcagcactccggtttatttgtacgatgaagtcaagcgg
acgctcctccgcctgccggagcagtatggcgtcgcgctgaccgcgccgcttattgatgca
ttgaccgctttgttcggcgccggtggcctagccgtcaaataa
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