Geobacillus subterraneus: GS3922_02565
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Entry
GS3922_02565 CDS
T04323
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03030
DNA replication
gsr03410
Base excision repair
gsr03420
Nucleotide excision repair
gsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GS3922_02565
03410 Base excision repair
GS3922_02565
03420 Nucleotide excision repair
GS3922_02565
03440 Homologous recombination
GS3922_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsr03032
]
GS3922_02565
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_02565
Enzymes [BR:
gsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GS3922_02565
DNA replication proteins [BR:
gsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GS3922_02565
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GS3922_02565
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS3922_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
XPG_I
DUF3913
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AMX82646
LinkDB
All DBs
Position
536392..539028
Genome browser
AA seq
878 aa
AA seq
DB search
MRLKKKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEERPTHLLVAF
DAGKTTFRHETFQEYKGGRQQTPPELSEQFPLLRELLNAYRIPAYELDRYEADDIIGTLA
ARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVEEKYGLTPEQMVD
LKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLAL
LSKQLAAIRRDAPVELSLDDIIYEGQDREKVIALFKELGFQSFLEKMDAPTAEDETPLME
MEFVIADGITDEMLADKAALVVEVMEENYHDAPIVGIALVNEHGRFFLRAEMALADSQFL
AWLADETKKKSMFDAKRAAVALKWKGIELRGVAFDLLLAAYLLNPAQDAGDVAAVAKMKQ
YEAVRPDEAVYGKGAKRSLPDEPTLAEHLVRKAAAIWALERPFLDELRSNEQDGLLIKLE
QPLATILAEMEFTGIKVDTKRLEQMGSELAEQLRAVEQRIYELAGQEFNINSPKQLGIIL
FEKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKVVHPD
TGKVHTMFNQALTQTGRLSSAEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIE
LRVLAHIADDDNLIEAFRRDLDIHTKTAMDIFHVSEEEVTATMRRQAKAVNFGIVYGISD
YGLAQNLNITRKEAAEFIERYFASFPGVKRYMETIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNVRSFAERTAMNTPIQGSAADIIKKAMIDLAARLKEERLQARLLLQVHDELILEAPK
EEMERLCQLVPEVMEQAVALRVPLKVDYHYGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaagaaaaaactcgttttaattgacggcaacagcgtggcgtaccgcgccttt
ttcgccttgccgcttttgcataacgacaaaggcattcatacgaatgcggtttacgggttt
acgatgatgttgaacaaaattttggccgaagaacggccaacccacttgctggtggcgttt
gacgccggaaaaacgacgtttcgccatgaaacgtttcaagagtataaaggcgggcggcag
cagactcccccggaactgtctgagcagtttccgctgttgcgtgagctgttaaacgcgtac
cgcatccccgcttatgaactcgatcgttatgaagcggacgatattatcgggacgcttgcc
gcccgcgctgagcaggaaggatttgaagtgaaagtcatttccggcgaccgcgatttaacc
cagctcgcctcccctcatgtaacggtcgatattacgaaaaaagggatcaccgatatcgag
ccgtacacgccggaaacggtcgaggagaaatacggcttgactccggagcaaatggtcgat
ttaaaagggctgatgggcgataagtcggacaacatccctggtgttccgggcatcggggaa
aaaacagcggtcaagctgctgaagcagtttggcacggtcgaaaacgtgctcgcatcgatc
gatgagatcaaaggggaaaagctgaaagaaaacttgcgccagtaccgcgatttggcgctc
ttaagcaaacagctggcggccattcgccgcgacgccccggttgagctgtcgctagatgac
atcatctacgaagggcaagaccgggaaaaagtgatcgcgttatttaaagagctcgggttt
cagtcgtttttggaaaaaatggatgcgccgacagccgaagacgagacgccgcttatggag
atggagtttgtcatcgctgacggcatcactgacgagatgctggccgacaaggcggcgctt
gtcgttgaggtgatggaagaaaactatcacgatgccccgattgtcggaatcgcgctagtg
aacgagcacgggcgttttttcctgcgtgcggagatggcgcttgcggattcgcaatttttg
gcctggcttgccgatgagacaaagaaaaaaagcatgtttgacgccaagcgggctgcagtt
gccttaaagtggaaaggaattgaactgcgcggcgtcgcctttgacttattgctcgctgcc
tatttgctcaacccggctcaagatgccggcgatgttgctgcagtggcgaaaatgaaacaa
tatgaagcggtgcggccggatgaagcggtctatggcaaaggcgccaagcggtcgctgccc
gacgagccgacgcttgctgagcatctcgtccgcaaagcggcggccatttgggcgctggaa
cggccgtttctggacgaattgcgaagcaacgagcaagacgggttgttaatcaagctcgag
cagccgctggcaaccattttggctgaaatggagttcactggaataaaagtggatacaaag
cggcttgagcagatgggttccgagctcgccgagcagctgcgtgccgtcgagcagcgcatt
tatgagctggccggtcaagagtttaacatcaactcgccaaaacagctcgggatcatttta
tttgaaaagctgcagctgccagtgctgaagaaaacgaaaacgggctattcgacctcggcc
gatgtgcttgagaagctcgcgccccaccatgaaatcgtcgaaaacattttgcattaccgc
cagcttggcaagctgcagtcgacgtatatcgaaggattgttgaaagttgtgcatccggat
acaggcaaagtgcatacgatgttcaaccaagcgctgacgcaaaccgggcggctcagctcg
gctgagccgaacttgcaaaacatcccgattcggctcgaagaagggcggaaaatccgccag
gcgttcgtcccgtcagagccggactggctcattttcgccgccgattactcgcaaatcgaa
ctgcgcgtcctcgcccatatcgccgatgacgacaatttaatcgaagcgttccggcgcgat
ttggatattcatacaaaaacggcgatggacatcttccatgtgagcgaagaggaagtcacg
gccactatgcgccgtcaggcaaaggcggtgaatttcggcatcgtttacggcatcagcgat
tatgggctggcgcaaaatttgaacattacgcgcaaagaagccgccgaatttattgaacgt
tacttcgccagctttccgggcgtgaagcggtatatggaaaccattgtgcaagaagcgaaa
cagaaaggatatgtaacgacgctgttgcaccggcgccgctatttgcctgatattacaagc
cgcaacttcaacgtccgcagctttgctgagcggacggcgatgaacacgccgattcaagga
agcgccgctgacattattaaaaaggcgatgatcgatttagcagcgcggctgaaagaagag
cggctgcaggcgcgcctgttgctgcaagtgcatgacgagctcattttggaagcgccaaaa
gaggaaatggagcggctatgccagctcgttccggaggtgatggagcaggcggttgcgctc
cgcgtgccgctgaaagtcgattatcattacggcccgacatggtatgatgccaaatga
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