Geobacillus subterraneus: GS3922_06235
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Entry
GS3922_06235 CDS
T04323
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr00061
Fatty acid biosynthesis
gsr00071
Fatty acid degradation
gsr01100
Metabolic pathways
gsr01212
Fatty acid metabolism
gsr02024
Quorum sensing
gsr04146
Peroxisome
Module
gsr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GS3922_06235
00071 Fatty acid degradation
GS3922_06235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GS3922_06235
09145 Cellular community - prokaryotes
02024 Quorum sensing
GS3922_06235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsr01004
]
GS3922_06235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsr04147
]
GS3922_06235
Enzymes [BR:
gsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GS3922_06235
Lipid biosynthesis proteins [BR:
gsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GS3922_06235
Exosome [BR:
gsr04147
]
Exosomal proteins
Exosomal proteins of breast milk
GS3922_06235
Exosomal proteins of breast cancer cells
GS3922_06235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LANA1_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
AMX85235
LinkDB
All DBs
Position
1247037..1248692
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AA seq
551 aa
AA seq
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MNKTRPYWPSGLPKKLRYVLGEQPLYHYLRHRGEREENEPAYIFYNKVVTWGTLLDHVRR
FARYLQEKGVRKGSYVALYMQNCPQYIIAHFAIQQLGGVVVPLNPMYRESELAYFFAEVP
LVGIIAGEEGLSRIQQAEQQTAPLSFTVACHYGDYADPAGEIPLCEEVLQPKQTCEGADE
FTAIIATSPPLDETAPIDLWNDVGLIVFTSGTTGRPKGAMLPYGSALFKTAASAQANRLT
EKREQLMAHSPLCHIAGMVMGLNMPVYTGHPCVLFTRFDPLATIKAIETYKVTAWYSIAP
MNAAILQALSSVNADLSSLKRNLATSFGLPVTKDLAERWAEAAGGCLLYEAAYGLSETHT
CDTFMPDDRVKFGSCGIPTYETDIRIVDPETKQELGPGQSGEIVVKNPGVFKGYFRRADA
TNETLKDGWVYTGDIGYVDEDGYLYFQGRLKEMIKVSGYSVFPEDVEALLNEHPAIRQCA
VIGVPDPMKGEVPKAFVVLHDSYKGKVASSDLIEWSKTNMAAFKYPRYIEFMDELPATPS
GKVLRKLLPRE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacacgtccgtattggccgagcggattgccgaagaagctccgctatgtgctc
ggcgaacagccgctctatcattatttgcgccatcgcggcgaacgcgaggaaaacgagccg
gcgtacatcttctacaacaaggtggtcacttggggaacattgctggatcacgtccgccgt
tttgcccgctatttgcaggaaaaaggggtgaggaaagggagctatgtcgccttgtacatg
caaaactgtccgcaatacatcatcgcccacttcgccatccagcagttaggcggcgtcgtc
gtcccgctcaacccgatgtaccgggaatcggagctcgcctattttttcgctgaagtgccg
cttgtcggcatcatcgctggggaagaaggattatcccgcattcaacaagctgaacaacaa
acggcgccgctgtcgtttacggtcgcttgtcattacggcgactatgcggatccggcaggg
gagatcccgctttgcgaggaggtgctgcaaccgaagcagacgtgtgaaggcgcggatgag
ttcaccgccatcattgccacttctccgccgcttgatgagaccgctcccattgacttgtgg
aacgatgtcggattgatcgtttttacgtcggggacgaccggtcggccgaaaggagcgatg
ctcccgtatggcagtgcgctctttaagacagcggcgtccgcgcaggcgaaccggctgacg
gaaaaacgcgaacagcttatggcccattccccgctttgccatattgccggcatggtgatg
ggactgaatatgccggtgtacaccggccatccgtgcgtattattcacccgcttcgacccg
ctggcaacgatcaaagccatcgaaacgtacaaagtcacggcatggtacagcatcgctccg
atgaacgcggccatcctgcaggcgctctcttctgtcaatgcggatttatcgagcctaaaa
cgcaacttagcgacaagcttcggcctgccggtgacgaaagaccttgccgagcggtgggcg
gaagcggccggcggctgcctgttgtacgaagccgcctacgggctgagcgagacgcatacg
tgtgacacgttcatgccggatgaccgtgtgaaatttggctcgtgcggcatcccaacgtat
gagacggacattcgcatcgtggatccggaaacgaaacaagagctcgggcccggacagtcg
ggggaaattgtcgtcaaaaatccgggggtttttaaaggctacttccgccgcgctgatgcg
acgaacgagacgctgaaagatgggtgggtgtacactggcgatatcgggtatgtcgatgaa
gacggctatttgtatttccaaggacggctgaaagagatgatcaaagtgtccggctacagc
gtctttccggaagacgtcgaggcgttgttgaacgagcatccagccattagacaatgtgcg
gtcatcggcgtgcctgacccgatgaaaggggaagtgccgaaagcgtttgttgttcttcac
gattcgtacaaaggaaaggtggcgtcgtcggacttgatcgaatggtcgaaaacgaatatg
gcggcgttcaagtatccgcgttatatcgagttcatggatgaattgccggcgacgccgtca
ggtaaagtattgagaaagctgctgccacgggaataa
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