Geobacillus subterraneus: GS3922_10190
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Entry
GS3922_10190 CDS
T04323
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gsr
Geobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsr03016
]
GS3922_10190 (truB)
Enzymes [BR:
gsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GS3922_10190 (truB)
Transfer RNA biogenesis [BR:
gsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GS3922_10190 (truB)
Prokaryotic type
GS3922_10190 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMX83997
LinkDB
All DBs
Position
complement(2088228..2089136)
Genome browser
AA seq
302 aa
AA seq
DB search
MDGVLLLNKPKGMTSHDCVAKVRRLLGIKKVGHTGTLDPNVSGVLPICLGKATRIAEFLT
GATKTYEGEVTLGAATTTEDADGDIIAARPVDRTIARAEIEAVFRSLTGDIEQTPPMYSA
VKVNGKKLYEYARAGLEVERPTRRVTIYELELLDERERFAGATVSFRFRVTCSKGTYVRT
LAVTIGERLGYPAHMSDLIRTASGPFQLADCVTLEEVERRAADGTADALLISIEQALFHL
PKYEINDKVAEKVKNGALLRLPAFLQELDGPVVLVTPEREALALYVKHPARPGVMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctcaataaaccgaagggaatgacgtcgcacgattgcgtggcg
aaagtgcgccgcctgctgggcataaaaaaggtcggccatacgggcacgctcgatccgaac
gtgtccggcgtgctgccgatttgtctcggcaaggcgacgcgcatcgctgaatttttaacc
ggagcgacaaaaacgtatgaaggagaagtgacgctcggcgcagcgacgacgactgaagac
gccgatggcgacatcatcgccgcccggccggtggatcggacgattgcgcgggcggagatc
gaagcggtatttcgcagccttaccggggacatcgaacaaacgccgccgatgtactcggcg
gtgaaagtgaatggaaaaaaactgtatgaatatgcgcgcgccggcctcgaagttgaacgt
ccgacgcggcgtgtaaccatttacgagcttgagctgcttgatgaacgcgagcggttcgcc
ggggcaacggtgtcgtttcgctttcgcgtcacgtgcagcaagggcacgtacgtccgtacg
ctcgccgtcaccatcggtgaacggctcggctacccggctcatatgtccgatctcatccgt
acagcgtccgggccgtttcagctggccgactgcgtaacgcttgaagaggtcgagcgccgg
gcggccgatgggacggccgatgccttgctcatttcgatcgagcaagcgctttttcatttg
ccgaaatacgaaatcaatgataaagtagcagagaaagtaaaaaacggggcgctgctccgt
ctccccgcctttttgcaggagcttgacgggccggttgtgctcgtgacgcccgagcgggag
gcgctggccctgtacgtgaagcatccggcgcgccccggtgtgatgaagccgctgaaagtg
tttcgttga
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