Geobacillus subterraneus: GS3922_10465
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Entry
GS3922_10465 CDS
T04323
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gsr
Geobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsr03032
]
GS3922_10465
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_10465
Enzymes [BR:
gsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GS3922_10465
DNA replication proteins [BR:
gsr03032
]
Prokaryotic type
DNA Topoisomerases
GS3922_10465
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GS3922_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Auto_anti-p27
ATG19
Toprim_2
Lar_restr_allev
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AMX84050
UniProt:
A0A143MJ67
LinkDB
All DBs
Position
complement(2138935..2141010)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYAPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLANMLDLDIHSDCRVVFHEITKDAIQQ
SFQQPRSINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLITDREN
EIRQFQPEEYWMIQAKFQKGTEIFAASFYGVDGEKLELKTEADVKGVLARLNGRAFTVKT
VTKRERRRSPVPPFTTSSLQQEAARKLNFRTKKTMMVAQQLYEGIDLGGEGTVGLITYMR
TDSTRVAETAQQEASAYIEATFGASYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELESNGVLFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRLLPDLEEGETVESETIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEEEMREVEIKDEPAGIDCDVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCHEGNIVERSSKRKRLFYGCDRFPECDFVSWDKPLARPC
PKCGGLLIEKKLKKGVQVQCTACDYEEQPEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttggttatcgtcgaatcgccaacgaaagcgaagacgattgaacggtac
ttaggaaaaaaatatacggtcaaagcttcgatgggccacgttcgcgatttgccaaaaagc
caaatgggcgttgatatagatcacggctatgcgccgaaatacattaccatccgcggcaaa
ggccaggtgattaaagagctgaaaacggcggccaaaaaggcgaaaaaagtgtttctcgcc
gccgacccggaccgagaaggggaggcgatcgcctggcatttggccaacatgctcgatctc
gatattcactccgattgccgcgtcgtctttcatgaaattacaaaagacgcgattcaacaa
tcgtttcagcaaccgcggtcaatcaatatgaatctcgtcgacgcccagcaggcgcggcgc
gtgctcgatcgcctcgtcggctataacatcagccctctcctgtggaaaaaagtgaaaaaa
gggctgagcgccggccgcgtccagtcggtcgcgctgcgcctcatcaccgaccgggaaaac
gaaatccgccaatttcaaccggaagaatattggatgatccaagcgaagtttcaaaaaggg
acggagatatttgccgcctcgttttacggcgttgatggggaaaagctcgagttaaaaacg
gaagcggacgtaaaaggagtgctcgcccgtttaaacgggcgggcgtttacggtgaaaacg
gtgacaaaacgtgagcgccggcgcagcccggtgccgccgtttacaacgtcgtcgcttcag
caggaagccgcgcgcaagctgaatttccgcacaaaaaagacgatgatggtcgcccagcag
ctgtatgaagggatcgacctcggcggcgaagggacggtcgggctgatcacgtatatgcgc
accgactcgacgcgcgttgccgaaacagcccaacaagaggcgtcggcatatatcgaagcg
acgttcggcgcttcctatgtcaatcaagaaaagcgaaaggaaaagaaaagcacgaacgcc
caagatgcccacgaagccattcgcccgacatcggcatttcgcgatccagataaagtgaag
ccgtatttgacgcgcgaccaattccggctgtataagctcatttgggaacggtttatcgcc
agccaaatggccgcggccgtgctcgacacgatgagcgtcgaactcgaaagcaacggagtg
ctgttccgcgccagcggctcgaaggtgaaatttccgggatttatgaaagtatacatcgag
ggaacggacgatcagacggaggaacaagatcggctgcttcctgatctcgaggaaggagag
acggttgaaagcgaaacgatcgagccgaagcagcattttactcagccgccgccgcgctat
acggaagcgcgcctagtgaaaacgttagaagagctcggcatcggccgtccgtccacttac
gcgccgacgcttgacacgatccagaagcgcaattatgtcgttctggagaacaagcggttc
gttccgacggagctcggtgaaattgtcgtcgagttgatgttagaattttttccggagatt
atcgacgtcgagtttacggcgaaaatggaaaaagagcttgatgaaattgaagaaggaaaa
gtagagtggatcaaagtcgtcgatgaattttaccgcgagtttgagaagcggctgaaagtg
gctgaagaagaaatgcgcgaagtggaaattaaagatgagccggccggcatcgactgcgac
gtgtgcggcagcccgatggtgtacaaaatgggccgcttcggcaagtttatcgcctgctcg
aacttcccggagtgccgccatacgaagccgattgtgaaagaaatcggcgtcaaatgccca
aaatgccatgaaggcaatatcgtcgagcgcagcagcaagcgcaagcgattgttttacggc
tgcgaccgcttcccggaatgcgactttgtttcatgggataaaccgcttgcccgcccgtgc
ccaaagtgcgggggactgcttatcgagaaaaagctgaaaaagggcgtgcaagtgcaatgc
acggcgtgcgactatgaagaacagccagaagcttga
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