KEGG   Geobacillus subterraneus: GS3922_11210
Entry
GS3922_11210      CDS       T04323                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gsr  Geobacillus subterraneus
Pathway
gsr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GS3922_11210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsr03019]
    GS3922_11210
Messenger RNA biogenesis [BR:gsr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GS3922_11210
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453 HVO_0513_N
Other DBs
NCBI-ProteinID: AMX84184
UniProt: A0ABN4NP71
LinkDB
Position
2287230..2288897
AA seq 555 aa
MKLLTDQQVGVFALGGLGEIGKNTYGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSYL
VKHAEKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKLI
EIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHGPL
SDIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMDNGE
VLGISDSEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
AAGPDIISRGFVYMRESGDLISEAQALIAKHLEKVLERKTNQWSEIKNEITETLAPFLYE
RTKRRPMILPIIMEI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaactattaacagatcaacaagttggcgtttttgccctcggcggactcggtgaaatc
gggaagaatacatacggcgtacaatttcaggacgaaattattgtgatcgacgcgggcatt
aaatttccggaagacgaactgctcggcatcgactacgtcatcccggactattcgtattta
gtgaagcatgcggaaaaagtgaaagggctgttcattacccacgggcatgaagatcatatc
ggcggcattccgtacttgctccggcaggtgaacatccccatttacggcggcaaactggcg
ctcgggctcattcgcaacaaactcgaagaacacggattgcttcgccaagctaagctcatt
gaaattcgcgaagacgatgtcatccgttttcaaaaaacagcggtcacctttttccggacg
acgcacagcattccggacagctacggcatcgtcgtcaaaacgccagtcgggcaaatcgtc
cataccggagactttaaattcgactttacgccggtcggcgaaccagccaatttgacgaaa
atggctgaaatcgggaaagaaggcgtcctttgcctgctttcagacagcacgaacagcgaa
attccgcatttcacgatgtcagagcggcgcgtcggcgaaagcattcacgacattttccgc
aaagtggacggacggattatttttgcgacgtttgcctccaacatccaccggcttcagcaa
gtgacggaagccgcagtcgccaacaaccggaaaatcgccgtctttggccgcagcatggaa
gcggccattgaaatcggccaagatctcggctacattaaatgtccgaaaggcacgttcgtc
gatgcaaacgaaatcaaccgactgccggcgaatcgggtgacgattttatgcaccggcagc
caaggtgaaccgatggccgccttgtcgcgcatcgccaacggcacgcaccggcaaattcaa
atcatcccgggtgacaccgtcgtcttttcttcatcgccgattccgggcaacacggtgagc
gtcaaccgaacgatcaacatgctgtaccgggccggcgccgaagtgatccacggcccgctc
agcgacatccacacgtccgggcacggcggacaggaagaacaaaagctgatgatccggctt
atgaagccaaaatattttatgccgatccacggcgaataccggatgcaaaaaatgcacgcc
aagctcgccatcgactgcggcgtgccggaggaaaactgctttattatggataacggcgaa
gtgctcggcatcagcgacagcgaagcgcgcatcgtcggcaaaattccgtccggctcggtt
tacatcgacggcagcggggtcggcgacatcggcaacatcgtcttgcgcgaccgccgcatt
ttgtcggaggaagggctcgtgatcgttgtcgtcagcatcaacatgaaagagttcaaaatc
gctgccgggcctgatattatctcccgcggcttcgtctacatgcgcgagtcgggcgatttg
atcagcgaggcgcaggcgctcatcgccaaacatctcgaaaaagtgcttgagcgaaaaacg
aatcaatggtcagaaattaaaaatgaaattactgaaacgctcgccccgttcttgtacgaa
cggacgaaacggcggccgatgatcttgccgatcatcatggagatttaa

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