Geobacillus subterraneus: GS3922_11340
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Entry
GS3922_11340 CDS
T04323
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr00061
Fatty acid biosynthesis
gsr00071
Fatty acid degradation
gsr01100
Metabolic pathways
gsr01212
Fatty acid metabolism
gsr02024
Quorum sensing
gsr04146
Peroxisome
Module
gsr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GS3922_11340
00071 Fatty acid degradation
GS3922_11340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GS3922_11340
09145 Cellular community - prokaryotes
02024 Quorum sensing
GS3922_11340
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsr01004
]
GS3922_11340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsr04147
]
GS3922_11340
Enzymes [BR:
gsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GS3922_11340
Lipid biosynthesis proteins [BR:
gsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GS3922_11340
Exosome [BR:
gsr04147
]
Exosomal proteins
Exosomal proteins of breast milk
GS3922_11340
Exosomal proteins of breast cancer cells
GS3922_11340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMX84206
LinkDB
All DBs
Position
complement(2313235..2314854)
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AA seq
539 aa
AA seq
DB search
MSEKRALSLYPEHVSFHIDIPDKTVCDVLHERAAQFGSQPALTFYSKTITYAELAAAVNR
FTSSLQALGVQKGDRVAIMLPNCPQYVIAYYGILQAGAIVTQVNPMLVERELAYVLNDSG
AETIIIYEPLYPRLVAVRGETAVKRAVTVSFGAPPSASLAAGDVTFEEFLAGGSGQVRPV
PIEPAHDVAVLQYTGGTTGRSKGAMLTHRNIFANVLQCAEFFKGTFEMGKERYLTVIPLF
HVFAMTSGMNLAIYQGAENILLPRFELKEVLETIRNKQPTVFPGVPTMYVAITNTPGVEQ
YGINSIKTCNSGSAPMPLELMRDFEGKTGAVVLEGYGLSEASPVTHCNPPFAARKPGTVG
IGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWNMPEETAVTLRDGWLYTGDL
ASIDEEGYVTIVDRKKDMIIAGGYNVYPREIEEVLYEHPAVKEAVAIGVPDPYRGETVKA
VIVLKDGQQASEDDILAHCRKNLASYKVPRIVEFRAELPKTNVGKILRRALREEASRPQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaacgggctttgtctctttatccggaacatgtgtcgtttcatattgacatt
ccggacaaaacggtatgcgatgtgctccatgaacgggcggcgcaatttggcagccagccg
gcgctgacgttttacagcaaaacgatcacgtacgccgagctcgccgccgcggtcaaccgc
ttcacttcgagcctgcaggcgcttggggtgcaaaaaggcgaccgcgtcgcgattatgctg
ccgaactgcccgcaatacgtcattgcttattacggcattttgcaggccggcgccatcgtc
acccaagtgaacccgatgctcgtcgagcgcgagctggcgtatgtgctgaacgattccgga
gctgagacgatcatcatttacgagccgctttatccgcgccttgttgcggtaagaggggag
acggccgtcaagcgggcggtcaccgtcagcttcggggcgccgccatccgcttcgttggcc
gccggagacgtcacgtttgaggagtttctcgccggaggaagcgggcaagtgcgtccggtg
ccgatcgagccggcgcatgacgtcgctgtgctgcaatacacgggcggaacgacagggcgc
tcgaaaggggcgatgctcacccatcgcaacatttttgccaatgttttgcaatgcgccgag
ttttttaaaggaacgtttgaaatgggaaaagagcgctatttgaccgtgatcccgctcttc
catgtcttcgcgatgacttcaggaatgaacttagccatttaccaaggggcggaaaacatt
ttgctgccgcgctttgagctgaaagaagtgctcgagacgatccgcaacaagcagccgacc
gtgttccccggcgtgccgacgatgtacgtcgccattacgaacacgccgggagtcgagcag
tacggcatcaacagcattaaaacgtgcaacagcggcagcgcgccaatgccgcttgagctg
atgcgcgatttcgaggggaaaaccggggcggttgttcttgaggggtacggactgtccgaa
gcatcgccggtgacgcattgcaatccgccgtttgcagcgcgcaagccagggacggtcggc
atcggcatgccgctgacggaatacaaagtcgtcgatgtggcgacgggtacgcaagaattg
ccgccgggggaagtcggtgagctcatcatccgcggcccgcaagtgatgaaggggtattgg
aacatgccggaggaaacggcggtgacgctgcgcgacggatggttgtacaccggggatttg
gcctcgattgacgaggaagggtatgtgacgatcgtcgaccgaaaaaaagatatgatcatc
gctggcggctacaacgtttatccgcgcgaaatcgaggaagtgctgtacgagcatccggcg
gtgaaagaggcggtggccatcggtgtgccggatccgtaccgcggcgaaacggtgaaggcg
gtcatcgttttaaaagatggacaacaggcgagcgaagacgacattctcgcccactgccga
aaaaacttggcgtcctataaagtgccgcgcatcgtcgaattccgcgctgagctgccgaaa
acgaacgtcggcaaaattttgcgccgcgccttgcgcgaagaggcgtcccgcccgcaatga
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