Geobacillus subterraneus: GS3922_12595
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Entry
GS3922_12595 CDS
T04323
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gsr
Geobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_12595
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GS3922_12595
Archaeal homologous recombinant proteins
GS3922_12595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
AAA_21
ABC_tran
ATP-synt_ab
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AMX84434
UniProt:
A0A143MK65
LinkDB
All DBs
Position
complement(2586681..2590025)
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTTLCDGGVFGIFGPTGSGKSTILDAITLALYGSVVRAA
NRTQAIINHAEQELFVSFTFELEHAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHRPEPV
VLADKLSDVDKAIGQLLGLTMEDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFHLERYG
DQLNKKLKDRLAVAEQEEEKIKAEKAGLGDASKAALEQAEAEERELTTLLAKRKKELEDV
EADVERTRQLWAWQQEKEAVERELAELRRREPEIRALEEKKERAEQAERIWPYREQYEQA
RRLRAEASKRYEELARKLEEAKAGYEEAVRRYEQARQEKASREPELLAQTERLRQAEQLE
RQMEALTHELAALNEERNRLAVREKAAQRRFEEAAAWYERGMKRQQELKEELQRYAEALA
GKDEVEQAHGEKRQIEQAAAAIARVDAQLRQKEAMWRQAEEERAKREHQAAAVGARLQQL
FRLVEKTYHSVCQRQQDVEKRLYALQQDMEAERKRMEEARTAELAAVLAERLRPGEPCPV
CGSREHPHSSTMPHSSGHGQLPNLEQERRQCEQDLQVLFSLKAQLEQLAGLAAGHGAPPI
FAAGRPAEEVDDVTVEVRALEQDVIEQKESVYRALAQWNEAETARREAENACRWATADRE
ALQAERQRLEEERQQLEQQWRHAYPSFSLETINAVYEQLREQEKRWRDVQKRLEDSVPFL
EEKQRAKEEAAEEQRRMETERIRLDSLINAKQQLSEEYARQRREKAGPSPAAVQLREAEA
EWRRLQSGEQQAYDEWQRAQKQHQTLESETKAAKQAYEEGVRREEEALARWRRALADTAF
TDAEEAERARATKEQCGEWDEAIRRYWRQVEQAEHRRAQLAAALGEAVVSAEQWEMLQRV
YAERKAQMETMTQQLGAIQAKVAELRKKHARFVELEAKQAQLSRQIERYKQLQTLLRGNS
FVEFMAEEQLEQVTAIAAERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVATLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLDMVISALEKLHTQRLAVGV
ISHVQEIRTRLPRRLIVEPAEPSGRGTRVRLETM
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatttcactgacgatcgccgggcttcatagcttccgcgaaaaacagacgatc
gatttcaccacgctatgtgatggcggcgtatttggcatttttggtccgaccggaagcggc
aagtcaacgattttagacgccattacgctggcgttgtacggcagtgttgtgcgggccgcc
aaccgcacccaagcgatcatcaaccatgctgaacaggagttgttcgtctcgtttacattt
gagcttgaacatgcggcgggggccaaacggtatacggtggagcgcagtttaaaaaaagtg
gatgaatggcggacgcgaagcgctgtctgccggctgatcgagcatcggccggagccggtc
gtgctcgctgacaagctgtccgatgtggacaaggcgattggacagttgctcggtttgacg
atggaggatttcactcgggcggtcgtcttgccgcaaggtaaatttgctgaatttttatcg
ctgaaaggggcggagcggcggcaaatgctgcagcgcctcttccaccttgagcggtacggc
gaccaactaaacaaaaagttaaaagatcggcttgccgtagctgagcaagaagaggaaaaa
atcaaagcggagaaggcagggcttggcgatgcgtcaaaagccgcgctcgaacaagcggaa
gcggaggagcgggagttgaccacactgcttgccaagcggaaaaaagagctcgaggacgtc
gaagcggatgttgaacggacgagacagctttgggcgtggcagcaagaaaaagaagcggtc
gagcgggagctggccgagctgcgccggcgtgagccggaaatccgtgcgctcgaagaaaaa
aaggaacgcgctgagcaggcggagcgcatttggccgtaccgggaacaatacgaacaggcg
cggcgcttgcgggcagaggcgtccaagcgctacgaagagctggcgcgaaagctcgaggaa
gccaaggccggctacgaggaagcggtgcgccgctacgaacaggcgcggcaggaaaaagcg
agccgcgaaccggagctgctggcgcaaacggagcggctgcgccaggcagaacagctcgag
cggcaaatggaggcgctcacgcatgagcttgctgccctcaatgaggaacgaaatcggcta
gcggttcgcgagaaagcggcgcaacgccggttcgaagaagcggctgcctggtatgaacgc
ggcatgaagcgacagcaggagctaaaagaagaattgcagcggtatgcggaggcgctagcc
ggtaaagacgaagtggagcaggcgcatggggagaagcggcaaatcgagcaagcggcagcc
gccatcgcccgtgttgatgcacagctccggcaaaaggaagcgatgtggcgccaggcggaa
gaggaacgggcaaagagggaacaccaggctgccgccgtcggcgcccggcttcagcagctg
tttcggctcgtagagaaaacataccattccgtctgtcagcggcagcaggacgtcgaaaaa
cggctgtacgcgctgcagcaagacatggaggcggagcggaagcggatggaagaggcgcga
acggcggaactggcggctgtgctggccgaacggctccgccctggtgagccgtgcccggtg
tgcgggtcgcgcgaacatccgcattcgtccacgatgccgcattcttccggccacgggcaa
ttgcctaacctcgagcaggagcgccggcagtgtgagcaagatttacaagtcttgttctcg
ctaaaggcgcagcttgaacagctcgcggggctggccgccggccatggggcgccccctatc
tttgccgccggccgcccggcagaagaggtggacgatgtcaccgttgaagtgcgggcgctc
gagcaagatgtcattgagcaaaaagaatctgtttatcgggcgctcgcccaatggaacgaa
gcggaaacggcgcggcgcgaagcggaaaacgcctgccggtgggcgaccgctgacagggaa
gcgttgcaagcggaaagacagcgtctcgaagaggagcggcagcagcttgagcagcagtgg
agacacgcctacccttcgttttcactcgagacgatcaatgcggtatacgagcagctgcgc
gaacaagagaaaaggtggcgcgacgtgcaaaaacggcttgaggatagcgtgccgttttta
gaagaaaaacagcgggccaaagaagaagcggccgaagaacagcgccggatggagacggag
cgcatacgccttgattcgcttattaacgctaaacagcagttatcggaagagtatgcacgg
cagcggcgcgagaaagccggccccagcccggcggctgtgcagcttcgggaagcggaagct
gaatggcgccggctgcaaagcggcgagcagcaggcgtatgatgaatggcaacgtgcgcaa
aaacagcaccagacgctagaaagcgagacaaaggcggccaagcaggcgtatgaagaaggg
gttcgccgcgaagaagaggcgctcgcccgctggcgccgcgcccttgccgatacggcgttt
accgatgcggaagaagctgaacgggcgagggcgacaaaagagcaatgcggtgagtgggac
gaagccatccgccgctattggcgccaagtggaacaggcggagcaccgccgggctcaactt
gcggccgccctcggcgaggcggtggtgagcgctgaacaatgggagatgctgcagcgcgta
tacgccgagcgaaaagcacaaatggaaacgatgacgcaacaacttggggccattcaagcc
aaagtggcggagttgagaaaaaaacatgcccgttttgttgaacttgaggcgaagcaagcg
cagctcagccggcagatcgagcggtataagcaactgcagacactgcttcgcggcaatagt
tttgttgagtttatggcggaagagcaactcgaacaagtgacagccatcgccgcggagcgg
ctgcaacggttaaccaggcaccgttactcgcttgaactcgattcgcaaggcggatttctc
atccgcgatgatgccaacggcggcgtcagacggccggtggcgacgctctccggcggggaa
acgtttttgacctcactgtcactggcgttggcgctgtcggcgcaaattcagctgcgcggc
gaatatccgctccggtttttctttttggatgaagggtttggcacgcttgatgccgaactg
ctcgatatggtcatttccgctttggaaaagctgcatacacaacggctggcggtcggcgtc
attagccatgttcaagaaattcgcacgcgtctgccgcggaggctcatcgttgagccggct
gagccgtccggccgcggcacgcgcgtccggctggaaacgatgtaa
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