Geobacillus subterraneus: GS3922_12610
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Entry
GS3922_12610 CDS
T04323
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gsr
Geobacillus subterraneus
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_12610
Enzymes [BR:
gsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS3922_12610
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GS3922_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMX84437
LinkDB
All DBs
Position
complement(2594950..2598471)
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVIAMSLRFLLGRSGSGKTAFCLEEIRRQLQEDPKGRTVVYLVPEQMTFQCEYALIHTD
GTEGMIRAQVFSFPRLAWRVLQETGGMNRYHVHDVGVQMMIRKIIEQRKQELKLFGRAAE
KSGFVEQMHEMITECKRYCLTPDELRRHAGVLEGGSGQPGRRLLADKLSDVALVYEELER
SLLGHYLDSEDYLRLLAEHIPRSGYLHGADIYIDGFHHFSPQEYMVIEQLLHRCRRVTVC
LTADRPYDEGMPDELDLFYLPAQTYRQLRELALANDIMIEPPVVLSANRRHQDGALAHLE
AQFHRRPLLPYEAETDAVRLYEAANRRAEIEAVAREIIRLVRDEEARYRDIALIIRQTEA
YRDLVKTVFFDFDIPYFMDEKEPMHHHPLIELVRAALETVVTRWRYEAVFRAVKTDLLFP
VDGDLAMWREAADKLENYVLAYGVKGEKWTSGERWTYRRYQALDGLNAPQTDEERQFEDK
LNEWRDALAAPLRRLERRLRRAADGRGLCTALYLFLEELQIPKKLEQMSAQAEADGRLIE
ARQHEQAWNAVVDLLDQYVEMLGAEPLPLAEFAKIIEAGLDRLEFALVPPAIDQVIVAQL
DRSRLIDVKYAFIIGANDGVIPAKAKEEGLMAEVEREQLRELGVTLAPGGREQLFYDPFF
VYLALACPSRRLYVTYPLADGEGKALMPSPLIKQLVQLFPRVSVHLCGNDPFDAPEEKPE
AFVTAPRATQTYLISQLRAWKRNYSIAPLWWDVYNVLISHPEWKGRVGQAVSALFYTNQA
AALKKQWSRRLYGKKIQASVSRMEQFQKCPYAHFASHGLRLKERNVFRLEAPDVGQLFHA
AIKQIADRVREQHLDWKKLSRSECERLSDEAVERIAPLIQQQVLSSSSRYEYMKRKLKNV
VSRTAHVLSEHARASGFAPVGFELAFGPGGDLPPLRFQLRDGTVMELVGRIDRVDQAESS
QGVLLRIIDYKSSAKTLDLTEVYYGLALQMFTYLDIVLTYAEQLVGKPALPAGVLYFHIH
NPIIQARQWLDDEMELERKLLEPFRMRGLLLADAEAIRLMDSQAANGQWSLIVPAQLTKN
GAIHSRSSVASASDFAALRQHVRRLFTDIGEQIADGVVSIAPYKLKNKTACEFCAFKPVC
QFDEALPSNEYRKLAPQTKDAVIETLAEGKDEK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgattgcgatgtcgctgcggtttttgcttgggcggtcgggaagtggaaaaacg
gctttctgccttgaagaaattcgccgccagctgcaggaagatccaaagggaaggacggtc
gtctatcttgtcccggaacaaatgacgtttcaatgtgaatacgcgctaatacatacggac
ggaacagaagggatgatccgcgcccaagtgttcagcttcccgcgtctcgcctggcgcgtg
ctgcaagaaacaggaggcatgaaccgttaccacgttcacgacgttggcgtgcagatgatg
attcgaaaaattattgaacagcgcaaacaagagctgaagctgtttggacgtgcggcagag
aaaagcggttttgtcgaacagatgcacgagatgatcacagaatgcaagcggtattgcttg
acgccggatgaactccgccgccatgccggcgtgctcgagggcggatcaggccagcccggc
cgccggctgctagccgataagttaagcgatgtggcgctcgtttatgaggagttggaacga
agtcttctcggccattatcttgactcagaagattatttgcgcctgctcgccgagcacatc
ccccgctccggctacttgcacggcgccgacatttatatcgacggctttcatcatttttcc
ccacaagaatatatggttattgaacagctgcttcaccgctgccggcgcgtcaccgtgtgc
ttgacggctgaccgcccttacgatgaagggatgccggatgagctcgatcttttttacttg
ccggcgcagacgtaccgccagttgcgcgagctcgctttggccaatgatattatgatcgag
ccgccggtcgtgctttccgcaaaccgccgccatcaagacggggcgctcgcccatcttgaa
gcgcagtttcaccgccgtccgctgttgccgtatgaagcggagaccgatgcggtccgcctt
tacgaggcagccaaccgccgcgcggaaatcgaagcggtcgcccgggaaatcatccgcctc
gtccgcgatgaagaggcgcgctatcgcgacattgcgcttatcatccgccagacagaagcg
tatcgcgaccttgtgaaaacagtgttttttgactttgacatcccgtattttatggatgaa
aaagagccgatgcatcatcacccgctcattgaactcgtgcgcgctgctttggagacggta
gtgacgcgctggcgttatgaggcggtttttcgtgctgtcaaaacggatttgctctttccg
gttgacggtgacttggccatgtggcgcgaggcggctgacaagctcgaaaactatgtgctc
gcctatggggtgaaaggcgaaaagtggacaagcggtgaacgttggacataccggcgctat
caggcgcttgacgggctgaatgcgccgcagacggatgaggagcggcagtttgaggacaag
cttaatgaatggcgtgacgcgctggcggccccgctccgccggcttgagcgccgtctgcgc
cgggctgccgacgggcgcggtctttgcacggcgttatatctctttttagaagagttgcaa
attccgaaaaaactagaacaaatgagcgcgcaggcggaagcggacggacgccttatcgaa
gcgcgccagcacgaacaagcgtggaatgcggtcgtcgacttgctcgaccaatacgtcgaa
atgctcggggcggaaccgctgccgcttgccgagtttgccaaaattatcgaagccgggctc
gaccggctggaattcgccctcgttccgccagcgatcgaccaagtgatcgtcgcccagctc
gaccgttcgcgcttgattgatgtcaagtatgcgtttatcatcggcgccaatgacggcgtc
atcccggctaaagcgaaagaagaaggactcatggccgaggttgagcgggagcaattgcgc
gaactcggggtaacgcttgcgccgggagggcgggagcagctgttttacgatccgtttttt
gtttacttggctcttgcctgtccgagccgacggctatacgttacatatccgcttgccgat
ggcgaggggaaagcgctcatgccgtccccgctcatcaagcagctcgttcaattgtttcca
cgtgtatctgttcatttatgcggcaatgatccgttcgatgcccccgaagagaagccggag
gcgtttgtcaccgcgccgcgggcgacacagacgtatctcatcagccagctgcgggcgtgg
aagcgaaattacagcatcgctccgctttggtgggatgtatataatgtgctgatcagtcat
ccggaatggaaggggcgagtagggcaggcggtgtcagcgctattttatacgaatcaggcg
gcggcgctcaaaaaacaatggagccggcggctgtacggaaaaaaaattcaggcgagcgtc
tcgcgcatggagcagtttcaaaaatgcccgtacgctcatttcgcctcacacgggctgcgc
ttgaaagagcggaacgtcttccgccttgaggcaccggatgtcgggcaattgttccatgcg
gccatcaagcaaattgccgaccgagtgcgtgaacagcatcttgactggaaaaagctatcc
agatcggaatgcgagcggctgtcggatgaggcagtcgagcggatcgccccgctcatccag
caacaagtgttatcgagctcgagccgctatgaatatatgaaacggaagctgaaaaacgtt
gtctctcgcacggcgcacgtattgagcgaacatgcgcgggcgagcggctttgccccggtc
ggatttgagttggcgttcggaccgggcggcgacttgccgccgcttcgctttcagcttcgc
gatggaacggtgatggagcttgtcgggcggatcgaccgcgtagatcaggcggaaagcagc
caaggcgtgctccttcgcatcatcgattacaaatcgagcgccaaaacgctcgatttgacg
gaagtttattacggtttagcgctgcaaatgttcacgtatcttgatattgtgctgacgtat
gctgaacagcttgtcggcaagccagcgttgccggccggggtgctttattttcatattcac
aatccgatcattcaagcacggcaatggctggacgacgaaatggaactggagagaaagctg
cttgaaccgtttcggatgcgcgggctgctgcttgccgatgccgaggcgatccggctgatg
gacagccaagcagcaaacgggcaatggtcgcttattgtgcccgctcagctaacaaaaaac
ggggcgatccactcgcgttcttcggtggccagcgcctctgattttgctgcgctccgtcaa
catgttcgccgcttgtttaccgacatcggcgaacagatcgccgacggtgtcgtatccatc
gccccgtataagctgaaaaacaaaacggcgtgcgagttttgcgcctttaagccagtatgt
caattcgatgaggcgttgcctagcaacgaatatcggaagcttgctccgcagacgaaggat
gcggtgatcgaaacattagcggaagggaaggacgaaaagtga
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