Geobacillus subterraneus: GS3922_14235
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Entry
GS3922_14235 CDS
T04323
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03420
Nucleotide excision repair
gsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GS3922_14235
03430 Mismatch repair
GS3922_14235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_14235
Enzymes [BR:
gsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS3922_14235
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS3922_14235
MMR (mismatch excision repair)
Other MMR factors
GS3922_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AMX84713
LinkDB
All DBs
Position
complement(2941329..2943503)
Genome browser
AA seq
724 aa
AA seq
DB search
MNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL
AITFTNKAAREMRERVQALLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTD
QLSVIKTILKEKNIDPKKFEPRTILGTISGAKNDLLAPEQFAKRASTYYETIVSDVYQEY
QQRLLRNHSLDFDDLIMTTIQLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
ERFRNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI
EHNVNRKPKRLWTENPEGKPIIYYEAMNEADEAQFVAGRIQEAVERGTRRYSDFAVLYRT
NAQSRVIEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMVSLSAKAAGALAAFRGQLEQWTQLQEYVSV
TELVEEVLDKSGYRDMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLAL
ISDLDELNGNDQTAEGDAVVLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLDDEDEMEEE
RRLAYVGITRAEEELVLSSAQMRTLFGNIQMNPPSRFLDEIPAHLLETASRRQTAASRPA
VSRSHGNGAVGGWKVGDRANHRKWGVGTVVSVRGGGDDQELDIAFPSPTGIKRLLAKFAP
IEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttgtctgaaaagttgctcgctcatctaaacaaggagcagcaagaggcggtc
aaaacaacggaaggcccgctgctcattatggccggggcggggagcgggaaaacgcgcgtg
ttgacgcaccgaatcgcctatttaatggcggaaaagcatgtcgcgccatggaacattttg
gccattacgtttacgaataaggcggcgcgcgaaatgcgggaacgcgtgcaagcgctctta
ggcggagcggcggaagacgtctggatttcgacgttccattcgatgtgcgtccgcatttta
cgccgcgacattgaccgcatcggcattaaccgcaatttttcgatcctcgatccgaccgac
cagctttcggtgatcaaaacgattttaaaagaaaagaacatcgatccgaaaaaatttgag
ccacggacgattttaggcacgatcagcggagcgaaaaacgatttgctcgcgccggaacaa
tttgcgaagcgggcctcgacgtattacgaaaccattgtcagcgatgtgtatcaagaatac
cagcagcgtcttctccgcaaccattcgcttgactttgacgatttgatcatgacgacgatc
cagctgtttgaccgcgtgccagacgtgcttcaatattatcaatataaattccagtacatc
cacattgatgagtatcaggatacgaaccgcgctcaatatacgcttgtcaaaaagctggcc
gagcggttccgaaacatttgcgccgtcggcgacgccgatcagtcgatttatcgctggcgc
ggggcggatatccaaaacattttatcgtttgagcgcgattatccgaacgcaaaagtcatt
ttgctcgagcaaaactaccgttcaacgaagcgcattttgcaggcggcgaacgaagtgatt
gaacataacgtcaatcggaagccgaagcggctttggacggaaaatccggaagggaagccg
atcatctattacgaagcgatgaacgaagcggacgaagcgcagtttgtcgccggccgcatt
caagaggcggtggagcgcgggacgcgccggtacagcgattttgcggtgctgtaccggacg
aacgcccagtcgcgcgtcattgaggaaatgttgttaaaagcgaacattccgtaccaaatt
gtcggcggcttaaagttctatgaccggaaagaaattaaagatattcttgcctatttgcgc
gtcattgccaatccggatgacgatttaagcctgcttcgcatcattaatgtgccgaagcgc
ggcatcggcgcctcgacgatcgataagctcgtccgctacgcggcggagcacgagctgtcg
ctgtttgaagcgcttggagagctcgagatggtcagcctgagcgcgaaggcggccggtgcg
ctcgcggcgttccgcggccagctcgagcaatggacacagctgcaggaatacgtctccgtt
accgaactcgtcgaagaagtgctcgacaaatccggctatcgcgacatgctcaaggcggag
cgaacgattgaagcgcaaagccggctcgagaaccttgatgagtttttatcggtgacgaag
cattttgaaaacgtgagcgatgataaatcgctcgtcgcctttttaaccgacttggcgctc
atttccgatttggacgagctaaacggcaacgaccaaacggcagaaggggatgcggtcgtg
ttaatgacgcttcatgctgctaaaggactcgagtttccggtcgtctttttgatcggcatg
gaagaaggcattttcccgcacaaccgttcgcttgatgacgaagacgagatggaggaagag
cggcggctggcgtacgtcggcatcacccgtgcggaagaagaactcgtgttgtcgagcgcg
caaatgcggacgttgtttggcaacattcaaatgaacccgccgtcgcgttttttagatgaa
attccggcgcatttgcttgagacggcttcgcgccgccaaacagcagcttcacgtccggcc
gtctcgcgttcgcatggaaacggcgccgtcgggggctggaaagtcggcgaccgggcgaac
caccggaaatggggagtcggcacagtcgtcagcgtccgcggcggcggcgacgatcaagaa
cttgacatcgccttcccgagtccgaccggcattaaacggctgctcgccaaatttgcaccg
attgagaaagtgtaa
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integrated database retrieval system
