Geobacillus subterraneus: GS3922_15650
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Entry
GS3922_15650 CDS
T04323
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03030
DNA replication
gsr03430
Mismatch repair
gsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GS3922_15650
03430 Mismatch repair
GS3922_15650
03440 Homologous recombination
GS3922_15650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsr03032
]
GS3922_15650
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_15650
Enzymes [BR:
gsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GS3922_15650
DNA replication proteins [BR:
gsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GS3922_15650
DNA repair and recombination proteins [BR:
gsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GS3922_15650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
TIP49
AAA_22
RCF1-5-like_lid
AAA_assoc_2
AAA_16
DnaX_C
AAA_19
AAA_5
AAA_24
PIF1
Rad17
AAA_7
AAA_14
DUF815
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AMX84930
LinkDB
All DBs
Position
complement(3200880..3202559)
Genome browser
AA seq
559 aa
AA seq
DB search
MAYQALYRVFRPQRFADMVGQEHVTKTLQSALLQHKISHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPAAEPCNECPACLGITNGTVPDVLEIDAASNNRVDEIRDIRDKVKFAPTSVRY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPATIISRCQRFDFRRIPL
SAIVSRLKYVANAQGVEASDEALSAIARAADGGMRDALSLLDQAISFSDGKLELDDVLAM
TGAASFAALADFIGAIYRKDTAAVLQQFEATMAQGKDPNRLVEDLILYYRDLLLYKTAPH
VEGAIQLAAVDEAFTSLSETIPLSDLYGAIELLNKSQQEMKWTNHPRLLLEVALVKLCHQ
PPAAPARTASELEPLVKRIETLEAELRRLKEQPPTLSSAAVPTKKTVKAVKTGGYKAPVG
RIHELLKQATHEDLALVKGRWADVLDTLKRQHKVSHAALLQESEPVAASASAFVLKFKYE
IHCKMATDPASSVKENVETILFELTNRRFEMVAIPEEEWGKIREEFIRNKEAKAEKSEEE
PLIAEAKRLFGEELIEIKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggcatatcaagcgttataccgtgttttccggccgcagcgcttcgctgacatggtcggt
caggaacacgtaacgaaaacattgcaaagcgccctgcttcaacataaaatatcgcacgct
tacctattttccggtccccgcggaacgggaaaaacgagtgcggcgaaaattttcgccaag
gcggtcaattgcgaacatgctccggcggctgaaccgtgcaacgaatgccccgcttgcctc
ggcattacgaacggaacggttcctgatgtgctggaaattgacgccgcttccaacaaccgt
gtcgatgaaatccgcgacatccgcgacaaagtcaagtttgcaccgacctcggtccgctat
aaagtgtacattattgacgaagtgcacatgttgtcgatcggcgcgtttaacgcgctgctg
aaaacattagaagagccgccgaaacatgtcatttttattttggccacgaccgagccgcat
aaaattccggcaacgattatttcccgctgtcaacggttcgactttcgccgcattccgcta
tcggccatcgtttctcggctgaaatacgtagcgaatgcccaaggggtggaagcatccgat
gaggcgctgtcagccattgcccgcgccgccgatggggggatgcgcgatgcgctcagcctg
cttgaccaagcgatttcgtttagcgatgggaagcttgagctcgacgatgtgctggcgatg
acgggggcggcgtcatttgccgcattagccgactttattggggccatctaccgcaaagat
acagcagcggttctccagcagttcgaagcaacgatggcgcaagggaaagacccgaaccgt
ctagtggaagatttaattttgtattatcgcgacctgttgctgtacaaaaccgccccccat
gtggaaggagctattcaacttgcagccgtcgatgaggcgtttacctcgctttcggaaacg
attcctctttctgatttatacggagcgattgagctgttgaacaaaagccagcaagagatg
aagtggacgaaccacccgcgcctccttttggaagtggcgcttgtgaagctttgccatcag
ccgcccgccgctccggcgcggaccgcctccgagctggaaccgttagtgaagcggatcgag
acgctggaagccgaactgcgccgcctgaaggaacagccgcccactctttcatcagctgcc
gtcccgacgaaaaaaacggtgaaggcggtaaaaactggggggtataaagcgccggtcggc
cgcattcacgaactgttgaagcaggcgacgcacgaggatttagcattggtgaaagggcgc
tgggctgatgtgcttgacacgctgaagcggcagcataaagtgtcgcacgccgccttgctt
caagagagcgagccggtcgcagcgagcgcctcggcatttgtgttaaagtttaagtatgaa
attcactgcaaaatggcgacagatccggcgagctccgtgaaggaaaacgttgagacgatt
ttgttcgaactgacgaaccggcggtttgaaatggtcgccattccggaagaagaatgggga
aaaataagggaagagtttatccgcaacaaagaagccaaagcggaaaaaagcgaagaagaa
ccgttgatcgccgaggcaaaacggctgttcggcgaagagctgatcgaaattaaagaataa
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