Geobacillus subterraneus: GS3922_16140
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Entry
GS3922_16140 CDS
T04323
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GS3922_16140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsr03400
]
GS3922_16140
Enzymes [BR:
gsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GS3922_16140
DNA repair and recombination proteins [BR:
gsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GS3922_16140
Prokaryotic type
GS3922_16140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMX85365
LinkDB
All DBs
Position
3309524..3310213
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AA seq
229 aa
AA seq
DB search
MPILKNDWAPLLEEEFQKPYYLKLREFLKEEYRTRTIYPDMHDIFNALHYTPYANVKVVL
LGQDPYHGPGQAHGLSFSVKPGVPVPPSLANIFKELHDDLGCYIPDNGYLVKWAEQGVLL
LNTVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHL
IIEAPHPSPFSAARGFFGHRPFSRTNAFLTKHGREPIDWQIENIGARAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctcaaaaacgactgggctccgctgcttgaagaggagtttcaaaagccgtac
tacttaaagctgcgcgagtttttaaaagaggagtaccggacgcggacaatttatccggat
atgcacgatattttcaacgcccttcattatacaccgtatgcaaacgtcaaagtcgtgctg
ctcgggcaagatccgtaccacggaccggggcaggcgcacgggcttagtttttccgtcaag
ccgggcgtgccggtgccgccgtccttagcgaacatttttaaagagctgcatgacgacctt
ggctgctatataccagataacggctatctcgtcaaatgggctgagcaaggggtgctgttg
ttaaacacggtgttgacggtccgccgcggccaggcgaactcccatcgcggcaaagggtgg
gaatatttcactgaccgcgtcattgagctcgtcaacgaaaaagacgatccggtcgtcttt
ttgctttggggccggaacgcgcaagagaaaaaagaacggattacgaatccgcgccatctg
attattgaagcgccgcacccgagcccgttttccgccgcgcgcggctttttcggccatcgc
ccgttttcgcggacgaacgcgtttttaaccaagcacggacgcgaaccgatcgattggcaa
atcgagaacatcggcgcccgcgctgaatga
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