Gallibacterium salpingitidis: NYR30_00055
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Entry
NYR30_00055 CDS
T09222
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR30_00055 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gss03019
]
NYR30_00055 (pnp)
03016 Transfer RNA biogenesis [BR:
gss03016
]
NYR30_00055 (pnp)
Enzymes [BR:
gss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NYR30_00055 (pnp)
Messenger RNA biogenesis [BR:
gss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NYR30_00055 (pnp)
Transfer RNA biogenesis [BR:
gss03016
]
Prokaryotic type
tRNA degradation factors
NYR30_00055 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
KH_SLS1_2
S1_RRP5
Csa5_I-A
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WKS99728
LinkDB
All DBs
Position
complement(9575..11728)
Genome browser
AA seq
717 aa
AA seq
DB search
MTPFVKQFKYGQHTVTLETGAIARQATAAVMASMDDTSVFVTVVAKKDVKEGQDFFPLTV
NYQERSYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFLNEIQIIATVVSVN
PQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFINDQFVLNPTMSEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVIEAIKEFAAEAGKPRWDWQAPAKNEA
LISRIKELSEARLGEAYRITEKQARYEQIDAIKAEVCATILAENSEDETITEGKIIDIIH
ELESRVVRSRILAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAITTLGT
ERDAQIIDELAGEIADHFLFHYNFPPYSVGETGLIGSPKRREIGHGRLAKRGVAAVMPTL
AEFPYVVRVVSEITESNGSSSMASVCGASLSLMDAGVPIKAAVAGIAMGLVKEDDKFVVL
SDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMQIALNQAKSARMHILNVME
QAIQTPRADISDFAPRIHTMKIDPKKIKDVIGKGGAVIRSLTEETGTSIDIDDDGTVKIA
ATDNNAAKAVMAKIEDIVAEVEVNKIYQGKVTRIVDFGAFVTVLGNKEGLVHISQISEER
VEKVTDYLQVGQEVTVKVVEIDRQGRIRLTMKDLQPANETSSVTDEENVIEESSADA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgactccatttgtgaaacaatttaaatatggtcaacatacagtaacgctggaaactggc
gcgatcgcacgtcaagcaactgcagcagtaatggctagtatggatgacactagtgtattc
gttaccgtagtagcgaaaaaagatgtgaaagaaggtcaagatttctttccattaactgtt
aactatcaagagcgtagctatgcagcaggacgtattcctggcggtttctttaaacgtgaa
ggtcgtccatcagaaggcgaaaccttaattgctcgtttaattgaccgtccaattcgtcca
ctcttcccagaaggtttcttaaatgaaatccaaattattgctactgttgtttctgtgaat
ccacaaatcagcccagatcttgttgcaatgattggtgcatctgctgctttaactttatct
ggcgtaccatttaatggcccgattggtgcagcacgcgttggttttattaatgatcaattc
gtacttaacccaactatgtctgaacaaaaacaaagccgtttagatttagtggttgcaggt
actgataaagccgtattaatggtggaatcagaagcagatattttaactgaagaacaaatg
cttgctgcggtggtctttggtcatcaacaacaacaagtagtgattgaagcgattaaagaa
ttcgctgctgaagctggtaaaccacgttgggactggcaagctcctgcaaaaaatgaagct
ttaattagtcgtattaaagaactttcagaagctcgtttaggtgaagcttatcgtatcact
gaaaaacaagctcgttatgaacaaattgatgcgattaaagcagaagtttgcgcaacgatt
ctcgccgaaaatagtgaagatgaaaccatcactgaaggtaaaatcatcgacattattcat
gaattagaaagtcgtgttgtacgtagccgtatcttagcaggtgaacctcgtattgatgga
cgtactgttgatactgtgcgtgcattagatatttgcactggtgtactaccacgtactcat
ggttctgcaatcttcactcgtggtgaaacccaagcattagcgattaccacgcttggtaca
gaaagagatgcgcaaatcatcgatgaattagcaggtgaaatagcagaccatttcttattc
cattacaatttccctccgtattcagtgggtgaaactggtttaattggttcaccaaaacgt
cgtgaaatcggccatggtcgtttggcaaaacgtggtgttgcggcggtaatgccaacttta
gctgaattcccatatgttgtacgtgttgtttctgaaattaccgaatcaaatggttcatct
tcaatggcttctgtttgtggtgcttcattatcattaatggatgctggtgtgccaattaaa
gcagctgttgcaggtatcgcaatgggcttagttaaagaagatgataaattcgtcgtattg
tcagatattcttggtgatgaagatcacttaggtgatatggacttcaaagtagcaggtact
cgtactggggttactgcattacaaatggatattaagatcgaaggtattacaccagaaatt
atgcaaattgcgttaaatcaagcgaaaagcgcaagaatgcacattttgaatgtaatggaa
caagcgatccaaactcctcgtgcagatatctctgatttcgctccgcgtattcatactatg
aagatcgatcctaagaagatcaaagatgttatcggtaaaggtggtgcagtaattcgtagc
ttaactgaagaaaccggtacttcaattgatatcgatgatgatggtacagtgaagatcgct
gcaactgataacaatgcagctaaagcggtaatggcgaaaattgaagatattgtagctgaa
gttgaagttaacaaaatctatcaaggaaaagtcactcgtatcgttgatttcggtgcattc
gttaccgtattaggtaacaaagagggattagtccacatttcacaaatttctgaagaacgt
gtagaaaaagtcactgactatctacaagttggtcaagaagttacagtgaaagtagtggaa
attgatcgtcaaggtcgtatccgtttaacaatgaaagatttacaaccagcaaatgaaact
tcgtctgtaacagatgaagaaaatgtgattgaagaatcttcagcggatgcgtaa
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