Gallibacterium salpingitidis: NYR30_00625
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Entry
NYR30_00625 CDS
T09222
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR30_00625 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gss03019
]
NYR30_00625 (rhlB)
Enzymes [BR:
gss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NYR30_00625 (rhlB)
Messenger RNA biogenesis [BR:
gss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR30_00625 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WKS99839
LinkDB
All DBs
Position
complement(112841..114067)
Genome browser
AA seq
408 aa
AA seq
DB search
MEHQYLTTTRFSDFSLHPTIQSALQQMGLEYCTPIQALSLPYSLQGKDIAGQAQTGTGKT
IAFLTALFQRLQQSPTAKQHLSALILAPTRELAVQIYHDAQLFAQHTGLSLGLAYGGDGY
EKQMQTLQAGVNVLIGTTGRVIDYVKQRVISLNQIQCVVLDEADRMFDLGFIRDIRYLLR
HCPPPTERLTMLFSATLSFKVRELAFEDMNDPHYVEIESTYKTADSVKEELFYPSNEDKM
KLLLTLLEEEWPERCIIFANTKHQCEKIWHYLIADGHRAGLLTGDVIQKKRFQLLEQFTH
GQLDILVATDVAARGLHIPQVTHVFNYDLPDDYEDYVHRIGRTGRAGETGISISFACEDY
AINLPAIEQYIGHHIPVSHYDPTALLPLPKIKKARSNKKYYSANAHHK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcaatatctgacaacaactcgttttagcgatttttctttgcatcccacgatc
caaagtgcattacaacaaatgggattagaatactgtaccccaattcaagcgctctcttta
ccctattcattacaaggtaaagatattgcaggtcaagcacaaacaggaacaggaaaaaca
atcgcttttttaactgcactgtttcaacgtttacaacaatccccaaccgcaaaacaacat
ttatctgcactcatcctggcaccgactcgcgaactggccgtccaaatttatcatgatgcg
caactatttgcgcaacacacaggattatccttaggcttagcctatggtggtgacggttat
gagaaacagatgcagacattacaggcgggagttaatgtcttaattggtaccacaggacgc
gtgatcgattacgttaaacaacgtgttatctctttaaatcagatccaatgtgtcgtatta
gatgaagctgatagaatgttcgatcttggttttattcgtgatattcgctatttactgcgc
cattgtccgccaccaactgaacgtttaacaatgctattttcggcaacactctcttttaaa
gtacgtgaattagcctttgaggatatgaatgatccacattatgttgagatcgaatcaacc
tataaaactgccgacagcgttaaagaagaacttttttatccgtcaaatgaagacaaaatg
aagttactactaacgttgcttgaagaagaatggcctgaacgttgtattatttttgctaac
actaagcatcaatgtgaaaaaatttggcactatttaatcgcggatgggcatcgtgcaggt
ctattaacaggcgacgtcatccaaaagaaacgttttcaattattagaacaatttactcat
ggacaattagacattctagttgctactgatgtggctgcgcgtggattacacattccgcaa
gttacccacgtttttaattatgacttacctgatgactatgaagattatgtgcatcgaatc
ggtcgtactggccgcgctggtgaaacaggaatctccatcagctttgcctgcgaagattat
gcaattaacctcccagcgattgagcaatatattggccatcatattccagtgagtcattat
gatccaacggcgttattaccattacctaaaatcaaaaaagcgcgttccaataaaaaatat
tattctgctaacgctcatcataaataa
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