Gallibacterium salpingitidis: NYR30_00955
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Entry
NYR30_00955 CDS
T09222
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR30_00955 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gss03019
]
NYR30_00955 (recQ)
03400 DNA repair and recombination proteins [BR:
gss03400
]
NYR30_00955 (recQ)
Enzymes [BR:
gss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR30_00955 (recQ)
Messenger RNA biogenesis [BR:
gss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR30_00955 (recQ)
DNA repair and recombination proteins [BR:
gss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR30_00955 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
HEM4
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WKS99902
LinkDB
All DBs
Position
190045..191886
Genome browser
AA seq
613 aa
AA seq
DB search
MCSNSDNKANAEQNDSPYLTQAKAVLQNVFGYQQFRQGQQQIIEATLNGQSSFVLMATGG
GKSLCYQIPALCFSGLTIVISPLIALMQDQVDQLLANGVAAAYLNSSQTLEQQKETEQQA
LSGKLKLLYISPERVMTSAFFYFIQQCQVSLIVIDEAHCISQWGHDFRPEYARLSNLTRV
FPNVPIMALTATADQITRKDILALLNLQNPFVYIGSFDRPNIRYTVVEKFKPQDQLVKFV
KAQKGRSGIVYANSRSKVERLAELLQRNGIAAKAYHAGFSNELREQVQRDFQRDNVQVVV
ATIAFGMGINKPNIRFVLHYDLPRSIESYYQETGRAGRDDLPAEAVLFYDQQDYLWLNKL
LQEKPDSAQKMIEQHKLQAMGEFAEAQTCRRLVLLNYFSEHRIEPCHNCDICLNPPQKYD
GLIDAQKIVSTVYRTGQRFSSYYVMAVLRGVSNQKIQELQHDKLSVFGIGKDQPQEYWHS
VIRQLIHLGFLTQNITNYSALQLTEAARAIVRGEIALPLALPRQNLSMINQHHQHSGTNR
ALFEQLRKLRKQLADRDNIPPYAVFNDATLEEMTRKTPTTLSEMLAINGVGYKKLERYAQ
PFLQVIEGYQRRL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctaattctgataataaggcgaatgctgaacaaaacgattcgccttatttaact
caagccaaagcagtgttgcagaatgtctttggttatcaacaattccgtcaaggacaacaa
cagatcattgaagcgacgctcaatgggcagagtagttttgtccttatggcaacgggcggc
ggcaaatctttgtgctaccaaattccggcattatgtttttctggtttaacgattgtaatt
tcaccattgatcgccttaatgcaagatcaagttgatcagttattagcgaatggtgttgca
gctgcctacttaaattctagtcagactctagaacaacaaaaagaaactgaacaacaagcg
ctttcaggcaaattaaaattgttgtatatctcgcctgaaagagtaatgaccagtgcattt
ttctattttattcagcagtgtcaggtcagtttaattgttattgatgaagcacattgtatt
tcgcaatggggacatgattttcgccctgagtatgcacgcttaagtaatttaacaagagtc
tttccgaatgtgccgattatggcgctgacagcaacggcagatcaaattacccgcaaagat
attttagcgctattaaatctacaaaatccgtttgtctatattggtagttttgatcgtccc
aatattcgctatacggtggtggaaaaatttaaaccacaagatcaattagtgaaatttgta
aaagcacaaaaaggtcgtagcggtattgtttatgctaatagccgtagtaaagtggaacga
ctggctgaattattgcaacgcaatggcattgcagcaaaagcttatcatgcaggatttagt
aatgagctaagagaacaagtacaacgcgattttcaacgtgataatgtacaagttgttgtc
gctactattgcttttggaatgggaattaataaaccgaatatccgttttgtattgcattat
gatttaccgcgcagcatcgaatcttattatcaagaaacaggacgagcagggcgcgatgat
ttacctgcagaagccgttttattttatgatcagcaagattatttatggctgaataaatta
ttacaagaaaagcctgattctgcacaaaagatgattgaacaacataaattgcaggcaatg
ggagaatttgctgaagcacaaacttgccgccgtttagtgttgttgaattatttttctgaa
caccgtatcgaaccttgtcataactgcgatatttgtttaaatccaccacaaaaatatgat
ggtttgattgatgcacaaaaaattgtttctaccgtttatcgcactgggcagcgttttagt
agttactatgtgatggcggtgttacgcggcgtcagcaatcaaaaaattcaagaattacaa
cacgataaattatcagtatttggtatcggcaaggatcaaccacaagaatattggcacagc
gttattcgccaattaattcatcttggttttttaacgcaaaatattactaattattcagca
ttgcagttaactgaagctgcacgagcaattgtacgtggtgaaattgccttaccattagct
ttaccacgtcaaaatttatcaatgattaatcaacatcatcaacacagcggtaccaatcgt
gcattgtttgagcaactacgcaaattgcgcaaacaattggcggatcgcgataatatccca
ccttatgccgttttcaatgacgctaccctagaagaaatgactcgcaaaactccaaccact
ttatcagaaatgttggcaattaatggtgttggctataaaaaattggaacgctatgcccaa
ccgtttttacaggtgattgaagggtatcaaagacgtctttag
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