Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
gss Gallibacterium salpingitidis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:gss00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR30_01545 (polA)
03410 Base excision repair
NYR30_01545 (polA)
03420 Nucleotide excision repair
NYR30_01545 (polA)
03440 Homologous recombination
NYR30_01545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:gss03032]
NYR30_01545 (polA)
03400 DNA repair and recombination proteins [BR:gss03400]
NYR30_01545 (polA)
Enzymes [BR:gss01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR30_01545 (polA)
DNA replication proteins [BR:gss03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NYR30_01545 (polA)
DNA repair and recombination proteins [BR:gss03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NYR30_01545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR30_01545 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(326049..328835)
|
AA seq |
928 aa
MPQIAENPFVLVDGSSYLYRAYHANFRLGLSNSAGEPTGAMYGVLNMLKSLLKQVQPTHI
AVVFDAKGKTFRDEMFEQYKSHRPPMPDDLRQQIQPLHQMIEALGLPLLIVEGVEADDVI
GTLAKQASAAGRDVLISTGDKDMAQLVDDRITLINTMTNTILDREGVIEKYGVPPEMIID
FLALMGDSSDNIPGVAGVGEKTAQGLLQGIGNLQQIYANLDKVAGLSVRGAKSLADKLVA
AKEDADLSYKLATIKTDVELAVTFDQLTLGTENRDQLIEYYGHYEFKRWLNELLSDQPTS
NNKEVSFSIASAAIPKATNHDPIKISIDRSAYQTILTAEQLEQWREKLAKAALFAIDTET
NSLNYMQAKLVGLSFALENGEAAYLPLQHQYLDCPQQLDWATVKSALKAILEDPKIKKIG
QNLKYDLTILARHGVNLQGVAYDTMLESYTLDSTGRHNMDDLAKRHLGHDTIHFEDLAGK
GKNQLTFDQIEIEKAAEYAAEDADVTMKLHQVLWQKLQQTPTLVKLFSEVELPLSQVLSR
MERYGVLIDSDLLYQQSQEITARLIQLEQQAHQLAGQPFNLASTKQLQEILFEKLGLPIL
KKTPKGAPSTNEEVLEELAYEHELPKLLVEHRGLSKLKSTYTDKLPQMIDPDTGRVHTSY
HQAVTITGRLSSSDPNLQNIPTRSEEGRKIRQAFIAQKGFKVVAADYSQIELRIMAHLSG
DAGLAYAFSHNLDVHRSTAAEVFDTPIEQVTSQQRYSAKAINFGLIYGMSAFGLARQLGI
PRNEAQTYIDRYFQRYPGVKQFMSDIQEKAKQDGYVETLLGRRLYLPELTSSNAMRRKAA
ERVAINAPMQGTAADIIKKAMIDLDRLIADKDDIKMIMQVHDELVFEVKEEKVEHYKALI
KEVMENAVKLTIPLIVEVNSGDNWDQAH |
NT seq |
2787 nt +upstreamnt +downstreamnt
atgccgcaaattgctgaaaatccattcgttctcgttgatggttcctcttatttatatcgt
gcttatcacgccaatttccgtttaggtttatccaactctgcaggcgaaccaactggcgct
atgtatggtgtgttaaatatgctgaaaagtttattaaaacaagtacagccgacccatatt
gctgttgtttttgatgctaaaggaaaaacttttcgtgatgaaatgtttgagcagtataaa
tcgcaccgtccaccaatgccggatgatttacgccaacaaattcaaccattacaccaaatg
attgaagctttaggtttaccactattgatcgttgagggggtagaggctgatgacgtaatt
ggtactttagcaaaacaggcatctgctgctggacgagatgtattaattagcactggcgac
aaagatatggcgcaattagttgatgatcgcattaccttaattaataccatgaccaacacg
atcttggatcgcgaaggggtaattgaaaaatatggcgtaccaccagaaatgatcattgat
tttctcgccttaatgggtgacagctcggataatattcccggtgttgctggcgttggtgaa
aaaaccgctcaaggattattacaaggcatcggcaacttacaacaaatttatgccaattta
gataaagtcgccggcttatctgtccgaggtgcgaaaagccttgccgataaattagtggca
gcaaaagaagatgcagacctctcttataaattagccacaattaaaaccgacgttgagtta
gcggtgacctttgatcaattaaccttaggaacagaaaatcgtgatcaattaattgaatat
tatggccattatgaattcaaacgttggttaaatgaattattatctgatcaaccaacaagc
aacaataaagaagtatcattttctatcgctagcgcagcgataccaaaagcgactaatcac
gatccaatcaaaatcagtattgatcgcagcgcttatcaaactattttgaccgcagaacaa
ctagaacaatggcgtgaaaaattagccaaagctgcattatttgccattgatactgaaacc
aatagcttaaattatatgcaggcaaaattagtcggtttatcttttgccttagaaaatggt
gaagcggcttatttaccattacaacaccaatatttagattgcccacagcagctcgattgg
gcaacagtaaaatcggcattaaaggctattttagaagatcctaagattaagaaaattggc
caaaatctaaaatatgatctgaccatcctggcgcgccatggtgtgaatttacaaggtgtt
gcatacgatacaatgttggaatcttatacgcttgatagcactggtcgtcataatatggac
gatctcgccaaacgtcatttaggacacgacactatccattttgaagaccttgccggcaaa
ggaaaaaatcagcttacctttgatcaaattgaaattgagaaagcagctgaatacgccgca
gaagatgctgatgtgacaatgaaattacatcaagtgttatggcaaaaactacaacaaaca
ccaactttagtgaaattattctcagaagttgagctgcctttatcacaagtattatcacga
atggagcgttatggcgttttaattgatagtgacttgttatatcaacaatcgcaggaaatc
actgctcgtttaatccaactagaacagcaagcgcatcaattagcaggacaaccttttaat
ttagcgtcaaccaaacagttacaagaaattctatttgaaaaattaggtttgccaatttta
aagaaaacaccaaaaggagcgccatctaccaatgaggaagtattggaagaattggcttat
gaacacgaattaccaaaactattggtcgaacatcgtggtctaagcaaattaaaatcgact
tataccgataaattgccgcaaatgatcgatcctgatactgggcgtgtccatacttcttat
catcaagcagttaccattaccgggcgtttatcttcatctgatcctaacttgcagaacatt
ccaacacgtagtgaggaaggacgtaaaattcgccaagcctttattgcacaaaaaggcttt
aaagtggtagccgccgactattcacaaattgaattgcggattatggcgcatctttctggt
gacgcaggtttagcttatgccttttcacataacttagatgtacaccgttctaccgctgct
gaagtgtttgatacaccaatcgaacaagttacttcccaacagcgttatagcgctaaagcg
attaacttcggtttaatctatggaatgagtgcttttggtttggctagacagttaggtatc
ccgcgtaatgaagcgcaaacctatattgatcgttatttccaacgttatccaggcgtaaaa
cagtttatgtcagatattcaggaaaaagcgaaacaagatggttatgtagaaaccttatta
ggacgtcgtctatatttaccggaattaacttcaagtaatgcaatgcgccgtaaagcagca
gaacgtgttgctatcaatgccccaatgcaaggtactgctgctgatattattaaaaaagcc
atgatcgatttagatcgtttaattgccgataaagatgatattaaaatgattatgcaagta
cacgatgaattggtgtttgaagttaaagaagagaaagtagaacactataaagcactaatc
aaagaagtaatggaaaatgcagttaaattaaccattccattaattgttgaggttaactct
ggcgataattgggatcaggcacattga |