Gallibacterium salpingitidis: NYR30_05605
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Entry
NYR30_05605 CDS
T09222
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
gss
Gallibacterium salpingitidis
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gss03016
]
NYR30_05605 (cmoB)
Transfer RNA biogenesis [BR:
gss03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
NYR30_05605 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_11
Methyltransf_31
Methyltransf_25
Methyltransf_12
CMAS
PCMT
NpmA
PapA_C
MTS
Motif
Other DBs
NCBI-ProteinID:
WKT00753
LinkDB
All DBs
Position
complement(1175679..1176644)
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AA seq
321 aa
AA seq
DB search
MFDFRPFYQQIATTELSNWLETLPAQLKYWQANAHGEYAKWAKVVEFLPDRTADEIDLKH
RVEAKLNQALSDGERQRMIHHLKQLMPWRKGPYHLFGVHIDCEWRSDFKWDRLLPHISSL
QDRLVLDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFEVVRKLLNNDRRANLIPLGI
EQMQPLQAFDTVFSMGVLYHRKSPLDHLSQLKAQLKKGGELVLETLVVDGDENTVLVPGE
RYAKMKNVYFIPSVAALINWLNKTGFSNIRCVDVVVTSLEEQRKTEWLENESLIDFLDPH
DQSKTIEGYPAPKRAVIIANK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattttcgacctttttatcaacaaattgcgacaactgagctgtctaactggtta
gaaaccttacctgcacagctcaaatattggcaggcgaatgcacatggtgaatatgcgaaa
tgggcaaaagtagttgagtttttaccagatcgtactgccgatgaaattgacttaaaacat
cgtgttgaagcaaaactaaatcaagcgttaagcgatggtgaacgtcaacgtatgattcac
catttaaaacagttaatgccatggcgaaaaggaccgtatcatctgtttggtgtgcatatt
gattgtgaatggcgttctgattttaaatgggatcgtttattgccacatatttcctcatta
caagatcgactagtgttagatgttggttgtggtagcggttaccatatgtggcggatggtt
ggtgaaggtgcgaaaatggtggttggtattgatccgacagaattgtttttgtgccagttt
gaagtggtcagaaaattacttaataatgatcgtagggcaaacctaatcccattaggtatt
gaacaaatgcagccgttacaggcgtttgacactgtcttttcgatgggcgtgctataccat
cgcaaatcgccattagatcatctttcccaactaaaagcacaactgaaaaaaggtggtgag
ttggttttggaaaccttagtggttgatggtgatgaaaatactgtattagtaccaggtgaa
cgctacgctaagatgaaaaatgtctattttattccatcggtggcagcgttgataaattgg
ttaaataaaacaggctttagtaatatccgttgtgttgatgtggtagttacctcattagag
gaacagcgcaaaactgaatggttagagaatgaaagcctgattgatttccttgatcctcat
gatcagagtaaaaccatcgaaggctatccagcaccgaaaagagcagttattattgccaat
aagtaa
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