Gallibacterium salpingitidis: NYR30_06580
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Entry
NYR30_06580 CDS
T09222
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
gss
Gallibacterium salpingitidis
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gss03009
]
NYR30_06580 (ycaO)
Ribosome biogenesis [BR:
gss03009
]
Prokaryotic type
ribosomal protein modification factors
NYR30_06580 (ycaO)
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Fe_dep_repress
DUF7294
Motif
Other DBs
NCBI-ProteinID:
WKT00931
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All DBs
Position
1394496..1396241
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AA seq
581 aa
AA seq
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MTEQTFILGKDAALEDSIATFQQKLKNLGFNIEEASWLNPVPNVWSVHIRDKDCPQCFSN
GKGASKKAALASALGEYFERLSTNYFFSDYYLGKAVAEGEFVHYPSEKWFPIEDPDLLPA
GILDEQLLDYFDPNQELTPDLLVDIQSGNAERGIVALPYVRQSDQKTIYIPQAIINNLYV
SNGMSAGNTINEARVQGLSEVFERYVKNKIIAEAISLPQIPAEILAKYPSVQESIAKLEE
EGFPIYAFDASLGGQYPVICVVLLNRNNGTCFASFGAHPNFAVALERTVTELLQGRSLKD
LDVFSPPSFNNDDVAEHANLETHFIDSSGLISWDLFKQESDYEFVHWDFSGTTTEEFANL
MALFQREEKEVYIMDYQHLGVYACRIIVPGMSDIYPTDDLIYANNNMGMDWREILLDLPN
FHHDQETYQELLEELDAQGIDDATRVREFIGIVAPKNTSWQTLRIGELKSMLYLAVGDLE
NALEWATWTYQMNSSVFNAEQANYYRTLISSLELFLDETRDPEQYRAVFERMYGEKAVEF
AWNAINGGNPFFLLPASDETLANFAEHQKLLQAYQKLQRAK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaacttttattttaggcaaagatgccgcattagaagattccattgcaacc
ttccaacaaaaattaaaaaatcttggttttaatattgaagaagcttcatggttaaaccca
gtaccaaatgtttggtcggtgcatattcgcgacaaagactgtccacaatgtttttctaat
ggtaaaggagcaagcaaaaaagccgcacttgcatctgcattaggtgaatattttgagcgt
ctttcaactaattactttttctctgattactatttaggtaaagccgttgctgaaggagaa
tttgttcactatccaagtgaaaaatggttcccgatcgaagatccagatttacttcctgcc
ggcattttggatgaacaattattagattatttcgatccaaaccaagaattaacgcctgat
ctattagtggatattcaatcaggtaatgcagagcgtggtattgtcgctttaccttacgta
cgtcaatcagatcaaaaaactatctatattccacaagcgatcatcaataatctttatgta
tcgaatggaatgtctgctggtaacacaattaatgaagctagagtgcaaggcttatctgaa
gtcttcgaacgctatgtaaaaaataaaattattgctgaagctattagcctgccacaaatt
ccagcagaaattttggcgaaatacccttctgtacaagaatctattgccaaattggaagaa
gaaggtttcccaatttatgcgtttgatgcttctttaggcggacaatatcctgttatttgt
gtggtattgttgaaccgtaataatggcacttgctttgcctctttcggtgctcaccctaac
tttgccgttgcattagaacgtaccgtaactgaattattgcaaggtcgcagcttaaaagat
cttgatgtgttctctccaccatcatttaataatgatgacgttgcagagcatgcaaatctt
gaaacccactttattgactcaagcggtttaatctcttgggatctcttcaaacaagaaagc
gattatgaatttgttcattgggatttttcgggtactacaacggaagaatttgctaattta
atggcgttattccaacgtgaagagaaagaagtctatattatggattatcaacatcttggc
gtatatgcttgccgcattattgtgccgggaatgtctgatatttatccgacggacgattta
atttatgccaacaataatatgggtatggattggcgcgagatcttattagatctaccaaac
ttccatcacgatcaagaaacctatcaagaattgttagaagagcttgatgcgcaaggaatt
gatgatgctactcgtgtacgtgaatttattggtattgtggcaccgaaaaatactagctgg
caaaccttgcgtattggtgaattaaaatcaatgctctatttagcggttggtgatttggaa
aatgcacttgaatgggcaacttggacctatcaaatgaacagttcagtatttaacgctgaa
caagccaattattaccgtactttaatcagcagcttagaactcttcttagatgaaactcgt
gatcctgaacaatatcgtgcggtatttgaacgtatgtatggtgaaaaagcagtggaattc
gcttggaatgcgattaatggcggtaatccattcttcttattaccagcgagcgatgaaacc
ttagcaaacttcgctgaacatcaaaaattattacaagcttatcaaaaattacaacgagct
aaataa
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