Gallibacterium salpingitidis: NYR30_08485
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Entry
NYR30_08485 CDS
T09222
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03030
DNA replication
gss03430
Mismatch repair
gss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR30_08485
03430 Mismatch repair
NYR30_08485
03440 Homologous recombination
NYR30_08485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gss03032
]
NYR30_08485
03400 DNA repair and recombination proteins [BR:
gss03400
]
NYR30_08485
Enzymes [BR:
gss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR30_08485
DNA replication proteins [BR:
gss03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NYR30_08485
DNA repair and recombination proteins [BR:
gss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NYR30_08485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF1803
Motif
Other DBs
NCBI-ProteinID:
WKS98802
LinkDB
All DBs
Position
1730053..1730769
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AA seq
238 aa
AA seq
DB search
MIWQFWHDPLKKLEKQRQKALDSADIPAIALPLFAQAIPNGDTPLSQLPLVALDFETSGL
DITQDRILSVGTVEINQQVLSLATAQHYYLSTGEAIKPETAIINHIRPEVLTLGMSEQSC
LQQLIPYLAGKIVIAHCATIEQNFLRKALTLSSSLPLPLIFLDTLCLARSLSEYWGKSNP
DLRLAEIRQHKGLPAYLAHNAIADAIATGELFLALIAEIFPHQPVTLRQVMKQCATQR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatttggcaattttggcacgatcccttaaaaaaattagagaaacagcggcaaaaagca
ctggattcagcggatattcctgcaatagctttaccgctatttgcacaagctattcctaat
ggagatacgccgttatctcaattgccgctagtcgcattagattttgaaacttcagggtta
gatattactcaagatcgcattttatcggttggtactgttgaaattaatcagcaagtgctc
tcgcttgctactgcacagcattactatctttctactggtgaagcaatcaagccggaaacg
gcaattatcaatcatattcgccctgaagttttaacgcttggaatgagtgagcaaagttgt
ttacaacaattgattccctatttggcaggtaaaattgtgattgcccattgtgcaactatc
gagcaaaactttctcagaaaagcgctaactttatcctcttcactacccttgccattaatt
tttcttgataccctttgtttagcgcgttcactttctgaatattggggaaaaagtaatccg
gatctacgtctagcagaaatcaggcagcataaaggcttgcctgcctatttggcgcataat
gctatcgcagatgctattgctactggagaactcttcttagctttaattgcggaaattttt
cctcatcagccggttacattgcgacaagtgatgaaacaatgtgcaacacaacgatga
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