Gallibacterium salpingitidis: NYR30_11840
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Entry
NYR30_11840 CDS
T09222
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYR30_11840 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gss03400
]
NYR30_11840 (uvrA)
DNA repair and recombination proteins [BR:
gss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR30_11840 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR30_11840 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_21
nSTAND3
AAA_25
cobW
Viral_helicase1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
WKS99390
LinkDB
All DBs
Position
complement(2481698..2484529)
Genome browser
AA seq
943 aa
AA seq
DB search
MDNIEIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRC
PTHHTPLTAQTISQMVDQVLALPEGQRMMLLAPVVKARKGEHTKLLDSIAAQGYIRARID
GEICDLSDPPKLALQKKHTIEVVVDRFKVRADLAPRLAESLETALELSGGVVVIASMDDT
QAEELVFSANFACPHCGYSVSELEPRMFSFNNPAGACPTCDGLGIQQYFDEKRVVQNPSL
SLAGGAIRGWDRRNFYYYQMLTSLAKHYHFDIEAPFEELPRNIQELVLHGSGSEEIEFQY
VNDRGDVVVRHHAFEGVLNNMARRYKETESMAVREELAKYISNRPCQDCHGSRLKEEARH
VFIGDTTLPQISEMSIGEALRYFEELSFDGQKAKIAEKILKEIKERLQFLVNVGLEYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLLHLRNLGNT
VIVVEHDEDAILTADYIVDIGPGAGVHGGAVVAQGTAQQIMQDPNSLTGRFLSGKEKIEI
PAQRTAMDPQRILKLSGASGNNLQNVDLEIPVGLFTCITGVSGSGKSTLINDTLFPIAQN
AINRAENQQHAPFKSIEGLEFFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDHCKGKRYNRETLEIRY
KGKTIHQVLEMTVEEAREFFDAIPMIARKLQTLIDVGLSYIRLGQASTTLSGGEAQRVKL
AAELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGKIIAAGTPEQVAEIQGSHTARFLKPILARK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataatatcgaaattcggggagcaagaacccacaatctaaagaacataaatcttact
attccacgcaataaactcgttgtgattactggattgtcaggatcaggaaaatcatcatta
gcttttgatacgctgtatgcagaagggcagcgtcgttatgtggaatcgctttccgcctat
gcacgtcaattcttatcattgatggaaaaaccagatgtcgatcatatcgaaggcttatca
ccggctatttcgattgagcaaaaatcgacgtcgcataatccacgctcaacggtgggtaca
attaccgaagtctatgactatttacgtttactctttgcgcgtgttggtgaaccacgttgt
ccaacccatcatacgccattaactgcacaaacgattagccaaatggtggatcaagtgttg
gcattaccggaagggcaacgaatgatgttgttagcgccggtggtaaaagcgcgtaaaggc
gaacatactaagttattggatagtattgccgcgcaaggttatattcgagcaagaattgat
ggggaaatttgcgatttatctgatccaccaaaattagcattgcagaaaaaacatacgatc
gaagtagtggtggatcgttttaaagtacgagcagatttggcgccacgtttagcggaatct
ttagaaacggcactagagttatctggtggtgttgtggtgatagctagtatggacgatacc
caagcggaagagttggtcttttctgcgaattttgcgtgtccacattgtggttattcggtg
tcagaacttgaaccaagaatgttctcctttaataacccggctggcgcttgcccaacttgc
gacggtttaggtatccagcaatattttgatgaaaaacgtgtggtacaaaacccaagtttg
tctttggctggcggtgcgattcgtggctgggatcgtcgtaatttctattattatcaaatg
cttacttcgctagcaaaacattatcattttgatattgaagcaccatttgaagagttgcca
agaaatattcaagaattagtattgcatggttcaggtagtgaagaaattgagttccaatat
gtgaatgatcgtggtgatgtagtagtgcgtcatcacgcatttgaaggggtactcaataat
atggcacgtcgctataaagaaactgaatcaatggcggtgcgtgaagaactggctaaatat
attagcaatcgtccatgccaagattgtcatggttcacgcttaaaagaggaagcgcgccac
gtctttattggtgataccactttgccgcaaatttcagaaatgagtattggtgaagcatta
cgctattttgaggaactctcttttgatgggcaaaaagcaaaaattgccgaaaagattttg
aaagaaattaaagagcgtctgcaatttttggtgaatgttggtttggaatatctttcactt
tctcgatcagccgaaacattatcagggggtgaagcgcaacggattcgtctggcgagccaa
attggtgctggacttgtgggcgtaatgtatgtgttagatgagccatcaatcggtttgcat
caacgagataatgaacgtttattgaatacgttgctgcatttacgcaatttaggtaatacc
gttattgtggttgaacacgatgaagatgcgattttaacggcggattatattgtggatatt
ggcccgggtgcgggagtgcatggcggcgcagtagtggcacagggtacagcacaacaaatt
atgcaggatcctaactcattaaccggacgttttctctctggaaaggaaaagattgagata
ccagcgcaacgcacagcaatggatccacaacgtatcttaaaattatcaggcgctagcggg
aataatttacagaatgtcgatctggaaattcctgttgggctatttacttgtattacaggt
gtttctggttcaggtaaatccacactgatcaatgatactttatttccaattgcacaaaat
gcgataaatcgtgcggaaaatcaacaacatgcaccatttaagtcaattgaaggattagaa
ttcttcgataaggtgattgatattgaccaaagtccaatcggacgtaccccacgttcaaat
ccagcaacttataccggtgtatttacgccaattcgtgagttatttgctggtgtgccagag
gctcgcgcgagaggttataacccaggacgtttcagttttaatgtgcgtggtggacgttgt
gaggcttgccaaggcgatggtgttatcaaggtagaaatgcacttcttacctgatatttat
gttccttgtgatcactgtaaaggtaaacgttataaccgagaaactttggaaatccgttat
aaagggaaaacgattcatcaagtgttagaaatgaccgttgaagaggcgcgagagtttttt
gatgctattccaatgattgctcgtaaattacaaacgttaattgatgtgggattatcctat
attcgtttaggacaagcctctacgaccttgtctggtggtgaagcgcaacgagtgaaattg
gcggcggaactctctaaacgtgatacgggtaaaaccttatatattcttgatgagccaacc
acaggattgcattttgctgatataaaacagttattgtcagtgttacatcgtttacgtgat
caagggaatacgattgtcgtcatcgagcataaccttgatgtgattaaaacagcagactgg
attgttgatttaggtcctgaaggcggtagcggcggtggtaagattatcgctgctggaaca
ccagaacaggtggcggaaattcaaggatcacatacagcacgtttcttaaaaccaatatta
gctagaaaatag
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