Gallibacterium salpingitidis: NYR30_13060
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Entry
NYR30_13060 CDS
T09222
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NYR30_13060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gss03021
]
NYR30_13060 (rpoA)
03400 DNA repair and recombination proteins [BR:
gss03400
]
NYR30_13060 (rpoA)
Enzymes [BR:
gss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NYR30_13060 (rpoA)
Transcription machinery [BR:
gss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NYR30_13060 (rpoA)
DNA repair and recombination proteins [BR:
gss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NYR30_13060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
WKS99616
LinkDB
All DBs
Position
2726856..2727839
Genome browser
AA seq
327 aa
AA seq
DB search
MQGSVTEFLKPHLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVFLTLTKSGIGPVVAADITHDGD
VEIVNPDHVICHLTDENASINMRIRVQRGRGYVPASARVHDEERPIGRLLVDACYSPVDR
IAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQPEV
KEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPAGIAED
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacacttagtagatattgagcaaattagc
tctacccatgctaaagtgaccttagagccgttagaacgtggctttggccatacattgggt
aatgcattacgtcgtattcttttgtcatctatgcctggttgtgcagtgactgaagttgaa
attgacggtgtattgcatgagtacagcagtaaagaaggggttcaggaagatattcttgaa
gtacttttaaacttaaaaggtctagcggttaaagtgcagaataaagatgacgtatttctg
acactaacaaaatctggaattggccctgttgttgccgcggacatcactcatgatggtgat
gttgaaattgtaaatccggatcatgtcatttgtcatttgacagatgaaaatgcctctatt
aatatgcgcattcgtgtacaacgtggtagaggttatgttcctgcttcagcacgtgtacat
gatgaagaacgtccaattggtcgtttattagtggatgcgtgttatagtccagttgaccgt
attgcttacaatgttgaagcagcacgtgttgagcaacgtactgacttagataagttagtc
attgaaatggaaactaatggaacattggatccagaagaagcaattcgccgagcagcaaca
attttagcagaacagcttgatgcattcgttgatttgcgtgatgttcgtcaacctgaagtc
aaagaagaaaaaccggaatttgatccgattttacttcgtccagtagatgacttagagttg
acagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgacttagtt
caacgaacagaagttgagttgcttaaaacacctaatcttggtaagaaatcacttactgaa
attaaggatgtactcgcttctcgtggcttgtcattaggtatgcgccttgagaattggcca
ccggcaggtattgccgaagactag
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