Bacillus sp. X1(2014): HW35_02245
Help
Entry
HW35_02245 CDS
T03242
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst03420
Nucleotide excision repair
gst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HW35_02245
03430 Mismatch repair
HW35_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gst03400
]
HW35_02245
Enzymes [BR:
gst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW35_02245
DNA repair and recombination proteins [BR:
gst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HW35_02245
MMR (mismatch excision repair)
Other MMR factors
HW35_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
AAA_30
NACHT
DEAD
DUF3463
BORCS6
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIM15252
LinkDB
All DBs
Position
complement(413842..416166)
Genome browser
AA seq
774 aa
AA seq
DB search
MSDLQNKDWLLEQNRVNRVVKEIDKKINELKSNRKKVTSDVLEIRKTFWEDVTVNLDEPD
DVIETAASIKQQAELLSERERTDHQLVKQLKTLERLKYSPYFGRIDFLEEGESTTEQVYL
GIASFIDEKNEDFLIYDWRAPISNLYYDYSPGHAEYQTPEGKISGEIKLKRQFIIKASEI
QGMFDTGVTIGDEMLQEVLGNNASTQMKNIVATIQREQNAIIRNENSRLLIVQGVAGSGK
TSAALQRVAYLLYRYRGSLKSENILLFSPNPLFNSYVATVLPELGEENMQQSTFQEYLSQ
RLGREFDVEDPFRQMEYLLNSVEDTDYRLRVNGIRFKASLDYKNLIDEYAQQLSESGLIF
KDITFRGNVLISKNEIYDYFYQLEHHYSIPNRLQLVQEWLRKELKKWVKRERSQSWVEDE
IQYLEKEDYLEAYKMLQKKERFTENTFDDFEREQKYLAELVVKEKFKPLFAMVKSLRFVN
MKQVYLQFLEKERKNLSNEWNQISKMTIEQIKENVIPYEDAVPFVYLQDLIIGRKSNTAI
RQIFIDEAQDYTPFQFSYLQSLFPYSKMTLLGDFNQAIFSGVTGAETVLSNLAFKKSDVE
TFVLTKTYRSTKEIVEFTRELIEYGKNIEPFNRSGRKPEVILTDHQSLDGLIIDKVRELK
DRGHQTIAIICRTEEESKQVFHSLKQKMPMNFIDKGTTNYEKGVSVIPSYLAKGIEFDAV
ILYDSSLYTSESERKLFYTVCTRAMHELTLFATNGCSPLMKGINASTYEVVHRM
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacagaacaaagactggctattggagcaaaaccgggttaatcgtgtggtt
aaggaaattgataaaaaaataaatgagttaaagtcaaatagaaagaaagttacctcagac
gttttagaaatccgtaaaacattttgggaagatgtaactgttaacctcgatgaacctgat
gatgttatcgaaacagctgctagtataaaacagcaggctgaactgctttctgaaagggaa
cggacggatcatcaattagtaaaacaacttaaaactctcgaacgattaaaatactctcca
tactttggtcgaattgattttcttgaagaaggagaaagtacaacagagcaggtttacttg
ggaattgcttcgtttatcgatgaaaagaatgaagattttctcatttatgattggcgtgcg
ccgatttcaaatctatactacgactattcacctgggcatgcagaatatcaaacgccagaa
gggaaaatttcaggagagattaaattaaaaaggcaatttattattaaagcatctgaaata
caggggatgtttgatacaggtgttacgatcggtgatgaaatgctacaagaggtccttgga
aacaatgcaagcactcaaatgaaaaatatcgtagcaaccattcaacgtgaacaaaatgcc
attatcaggaatgaaaacagtcgattactcatcgtacaaggagtagccgggagcggaaaa
acatcggctgccctacagcgtgtagcctatttattataccgttaccgtgggtctttaaag
tcggaaaatattttgcttttttcaccgaatcctttgttcaatagttatgtggcgaccgta
ttgccggaactaggtgaagaaaatatgcagcaatccacctttcaagaatatttgtctcaa
agattaggaagagagtttgatgtcgaggacccatttaggcaaatggaatatttgttgaac
agtgtagaagatacggattatcgtttacgagtaaatggtatccgctttaaggcaagttta
gattataagaatcttattgatgaatatgctcaacaattgtccgagagtggattaatattt
aaggatataacctttagaggaaatgtcctcatttccaaaaatgaaatatatgattatttt
tatcaattggaacatcattactccattccaaatcgtttgcaacttgtccaagaatggcta
cgaaaagaactgaagaaatgggttaagcgtgagcgttctcagagctgggtggaggatgag
attcaatatcttgaaaaggaagactaccttgaggcttataaaatgctgcaaaagaaagaa
cgttttactgaaaatacattcgatgattttgagcgcgaacaaaaatatttggcagaattg
gtcgttaaggaaaaatttaagccgttatttgctatggtaaagagtttgagatttgtaaat
atgaagcaggtatatcttcagtttttagagaaggaaagaaagaacctttccaacgaatgg
aatcaaatttcaaaaatgacaatagagcaaataaaggaaaatgtgattccttacgaagat
gcggtaccatttgtttatcttcaagatttaatcatagggaggaaatcaaacaccgcaatt
cgtcaaatttttattgatgaagcgcaagattacactccctttcaattttcatatcttcag
tctttatttccatatagtaaaatgactttattaggtgatttcaaccaggcgattttttct
ggagtaacgggtgccgaaacggtactgtctaatcttgccttcaagaagtcggatgttgag
acatttgtattaacaaaaacctatcgttctacaaaagaaattgtggaatttacaagagaa
ttaatagagtatggtaaaaatattgagccatttaaccgtagtggaagaaaaccagaagta
attttgacggatcatcagtcattagatggactcatcatcgataaggtaagggaacttaag
gatagaggtcatcaaaccattgcgataatttgtagaactgaagaggaaagtaaacaagtg
ttccattcgctcaaacaaaaaatgccaatgaatttcattgataaaggaacgacgaattat
gaaaaaggagtttctgtcattccttcctaccttgcaaagggaattgaatttgatgcggtc
attttatatgacagctctctatatacgagcgaaagtgaaaggaagcttttttatacagtt
tgcacaagggcaatgcatgaattaactttatttgcgaccaatggatgtagtccgctgatg
aaaggtattaatgcgagcacttatgaagttgttcatcgaatgtag
DBGET
integrated database retrieval system
