Bacillus sp. X1(2014): HW35_16740
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Entry
HW35_16740 CDS
T03242
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gst
Bacillus sp. X1(2014)
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gst03032
]
HW35_16740
03400 DNA repair and recombination proteins [BR:
gst03400
]
HW35_16740
Enzymes [BR:
gst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HW35_16740
DNA replication proteins [BR:
gst03032
]
Prokaryotic type
DNA Topoisomerases
HW35_16740
DNA repair and recombination proteins [BR:
gst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HW35_16740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Cys_rich_CPXG
zf_Rg
SAND
Auto_anti-p27
DUF4675
Motif
Other DBs
NCBI-ProteinID:
AIM17691
LinkDB
All DBs
Position
3218043..3220121
Genome browser
AA seq
692 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGRKYKVKASMGHVIDLPRSQTGVDVENGFQPKYITIRGK
GPILKELKTAAKKAKKVFLAADPDREGEAIAWHLAQSLGVDTNSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVAVRLIIDREN
EIKAFTPEEYWTIEADFIKGKESFKAVFHTLAGKEKTELKTEQDVQKVLQEINDNKFKVI
SVTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELGKEGTVGLITYM
RTDSTRISEVAQNEAADYIRSVFGENYLKTEQRKEKKQTNAQDAHEAIRPTRAFRDPNSL
KEFLSRDQLRLYKLIWERFLASQMAQAVMDTMSVDLQNGSAIFRATGSKIKFHGFMKLYV
EGTDDQVEEVGKMLPELNEGDEVFKKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVSLENKRFVPTELGEIVHELMLEFFPEIVDVEFTAKMEEGLDHIEEG
QIRWVELVDEFYKEFKVHLEKAEKEMQEVEIKDEPAGEDCEICGSPMVFKMGRYGKFMAC
SNFPDCRNTKPIVKDIGVTCPNCKEGTIVERKSKKKRVFYGCSRFPECEFLSWDKPLPRS
CPKCDGLLVEKKLKKGVQVQCVACDYKEEPQS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttcttgtaatcgtagaatcgccagcaaaagcgaagacgattgaaagatat
ttaggaagaaaatataaagtgaaagcttcaatgggacatgttatagacttacctcgtagc
caaacgggagtagatgttgaaaatggatttcagccaaaatacattacgattcgtggtaag
ggaccaattttaaaagagttaaaaacggctgcaaaaaaagcgaagaaagtatttctggca
gccgaccctgaccgcgagggagaagctattgcttggcatttggcacaaagtttgggtgtt
gatacaaattctgattgccgcgttgtttttaatgaaatcacgaaggatgcaattaaagaa
tcctttaaacacccacgtccaattaatatggatttagtagatgcacagcaagccagaaga
atattagatcgacttgtaggctataacataagtccaatcctttggaaaaaggtgaaaaaa
ggattaagtgcaggcagggtacaatctgttgccgttcgattaatcattgatcgggaaaat
gaaattaaagcgtttaccccggaagaatattggacaatcgaggcagactttattaaggga
aaagagtcatttaaagctgtttttcatacgttagcgggaaaagagaaaacggagctgaag
acagaacaagatgttcaaaaagtattacaagagataaatgataataagtttaaggttatt
tctgttacgaaaaaagaacggaaaagaaatcctgctccaccatttactacgtcttcttta
cagcaggaggcagccagaaaattaaatttccgtgctaaaaaaacaatgatgcttgcccaa
caattatatgaagggatagaactcggaaaggaagggacagttggtctcattacttacatg
agaacagattcaactagaatttccgaagttgcgcaaaacgaagcggcagattacattcgt
tcagtatttggagaaaattatttaaaaacggaacaaaggaaagagaaaaagcagactaat
gcacaagatgctcatgaagccattcgtccaactagggcatttagagatcctaatagttta
aaggaatttttatcacgagaccaattaaggttatataaattaatttgggaacggttccta
gccagccaaatggctcaagcggtaatggacactatgagcgtagatttacaaaatggaagt
gccatcttccgtgcaacaggatcaaagatcaaatttcatggctttatgaagttatatgtg
gaaggaacagatgatcaagttgaggaagtaggcaaaatgcttcctgaacttaatgaaggt
gacgaagttttcaagaaggatattgagcctaagcagcattttacacagccgcctccaaga
tatacagaagcaaggttggtaaaaacccttgaagagcttggcatcggtcgtccatccacc
tacgctcctactttggatacgattcaaaagcgtggatatgttagccttgaaaataaacgc
tttgttccaacagagctcggggaaatcgtccatgaattaatgttggagttcttcccggaa
atcgttgatgtagaatttaccgctaaaatggaagaagggctggatcatattgaagaaggc
cagatccgatgggtggaattagttgatgagttttacaaagaatttaaagtacacttagaa
aaagccgagaaagaaatgcaggaagtagaaattaaagatgaacctgcaggggaagattgt
gaaatctgtggcagtccgatggtgtttaaaatgggccggtatggaaaatttatggcctgc
agtaatttccctgattgccgtaatactaaaccaattgtcaaagatatcggtgtaacttgt
cctaattgtaaagaagggaccattgttgaaaggaaaagtaagaaaaaaagagtattttac
ggttgcagtcgctttcctgagtgtgaatttttatcttgggataagccgttgccaagatca
tgtccaaaatgtgacggtcttcttgtagaaaagaaattaaagaagggcgtccaagttcag
tgtgttgcttgtgattataaagaagaaccacaaagttag
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