Bacillus sp. X1(2014): HW35_16845
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Entry
HW35_16845 CDS
T03242
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gst
Bacillus sp. X1(2014)
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gst03016
]
HW35_16845 (truB)
Enzymes [BR:
gst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HW35_16845 (truB)
Transfer RNA biogenesis [BR:
gst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HW35_16845 (truB)
Prokaryotic type
HW35_16845 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
RNA_pol_Rpb5_C
Motif
Other DBs
NCBI-ProteinID:
AIM17712
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All DBs
Position
3242506..3243420
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AA seq
304 aa
AA seq
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MEGIIPLYKPAGMTSHDCVYKLRKILKTKKVGHTGTLDPDVTGVLPICIGKATKIAEYIT
DAGKAYEGEVTIGFSTTTEDASGEVVERKAVERTISREEIEQVLQSLQGEIQQTPPMYSA
VKVGGVRLYEYARKGIEVERPTRQITIYSIELLDERKEFSGETITFRFKVQCSKGTYIRT
LAVMIGERLGYPAHMSWLKRTQSASYRLEDCLTFEEIENKMEEGRLDEILKPLESALSHL
PKMRINDKVAEKVKNGALLKEPPYLKSINGPIIAETADGLALAIYEKHPNKPGLLKPVKV
LRNE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaagggatcataccattatataaaccagcaggaatgacttctcatgattgtgtttat
aaactccgaaagattttaaaaacgaaaaaagtaggacatacgggaacgcttgatcccgat
gtaacaggggtgcttcctatttgtatcgggaaagcaacaaaaattgctgaatatatcact
gatgctggaaaggcatatgaaggagaagtgaccatcggtttttctacaacaaccgaagat
gcttcaggtgaagtggttgaacgaaaagcagtcgaacgaacgatttctcgtgaggaaatt
gaacaagtccttcaatcattgcaaggggaaatacagcagacccctcctatgtattcagca
gtaaaagttggcggtgtacgcctttatgaatacgcaaggaaaggaatagaagtggaaagg
ccaacccgccaaattaccatctattctattgaactccttgacgagagaaaagaattttca
ggggaaaccataacatttcgctttaaggtccaatgcagtaaagggacttatattcggact
ttggctgtcatgattggtgaaagattgggatatcctgcccatatgtcatggttgaaaaga
acgcaatctgcttcctatagattggaggattgcctgacctttgaagaaattgaaaataaa
atggaagagggaaggctagatgaaatcttaaagcctttagaatcggcgctttctcatttg
ccgaaaatgcggataaatgataaagtagcagagaaagtaaaaaatggtgcattattaaaa
gaacctccatatttaaaatcaattaacggacccattattgctgaaacggcagatggcttg
gctttagcgatttatgagaaacatccgaacaagccaggacttctaaagccagtaaaggta
ttaagaaatgaatag
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