Gavia stellata (red-throated loon): 104250285
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Entry
104250285 CDS
T08384
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104250285 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104250285 (XRCC5)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104250285 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
DUF6005
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
104250285
NCBI-ProteinID:
XP_009815841
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSNSASGEESSLEQAKKVMTKFVQRQVFAESRDEVAVVLFGTDGTRNDLASGDQYQNITV
HRSLMLPDFDLLEDIQDVIKPGSEQADFLDAIIVCMDLLQKETIGKKYEKRHIELFTDLS
SPVSEDQLEIIIANLKKTGISLQFFLPFPVDVDDGGGDTSAGVCSQMHRNSFPRKGLTEQ
QKEGVDVVKKLMHTLDEEGGLEEIYTFRESLERLSMFKKIERRPMAWPCQLTIGSNLSIR
IVAYKSVTEEKVKKMWTVVDAKTLRKDDVQKETVYCLNDDDETEVQKDDTIQGFRYGSDI
VPFSKEDEEQMKYKTEAKCFSVLGFSRSSQIQRHYYMGNQVLKVFAVKDDENAAVAFSAL
VHALDELKVVAIVRYAYDRRCNPQVGVAFPYIKDAYECLIYVQLPYMEDLRQYIFSSLKN
NKKCIPTADQLSAVDSLIDSMNLVYEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFH
PNDPLPPVEQHLLEMLEMPRVVKERCQAPLEKVKALFPLKEVVKKKEEKTAQDIFKDNED
GPNPKKPKIEDEEGSFSIIKLAEGNVTSVGSVNPGEDFRILVRQKNADFKD
NT seq
1774 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattctgcctctggtgaggagtcttcacttgaacaagccaagaaggttatgaca
aagtttgtgcagcgacaggtttttgctgagagtagagatgaagtcgctgtagttttgttt
ggcacggatggtactaggaatgaccttgccagcggggatcaataccagaacattactgta
cataggtcactaatgctaccagattttgatttgctggaagacattcaagatgtgattaaa
ccaggctctgaacaagcagactttctggatgcaattattgtgtgcatggacttgcttcag
aaggaaacaataggaaagaaatatgagaagagacacattgaactgtttacagaccttagt
agtcctgtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacaggaatt
tcacttcagttttttctgccatttccagtggatgttgatgatggaggtggagatacaagt
gccggtgtatgttctcaaatgcacagaaactcttttccaagaaagggtttaactgagcaa
cagaaggaaggcgttgatgtggtgaagaaactgatgcatactttggatgaagaaggaggg
ctggaagaaatttatactttcagagagagcctggagcgtctttcaatgtttaagaaaata
gaaagaagacctatggcttggccctgccagctcactattggttctaatttgtctataagg
atcgtggcctacaaatcagtcactgaagagaaggtgaaaaaaatgtggacagttgtggat
gctaaaaccctcagaaaagatgacgtgcaaaaagaaactgtttactgcttgaatgatgat
gatgagacagaggttcagaaagatgatactattcaagggtttcgctatggaagtgatata
gttcctttttccaaggaagatgaagagcaaatgaaatacaaaacagaagcaaaatgtttt
tctgttctgggattcagcagatcctctcagatccagaggcattactacatgggcaaccag
gttttgaaggtctttgcagtgaaagatgatgagaatgcagcagttgctttttctgccctt
gttcatgcattggatgagttgaaagtggtagctatagtgcgttacgcttatgatagaaga
tgcaacccgcaagttggggtagcttttccatatattaaggatgcatacgagtgtctcatc
tatgtgcaactaccctacatggaagacttaagacagtacatattttcatctttgaaaaac
aataaaaaatgcattcctacagcggatcagttatctgctgttgactctttgattgattct
atgaatttggtttatgaagatgatgatggagaaacttttgaggacctgtttaagcccagc
aaaatcccaaaccctcattttcagaggttatatcagtgtttgcagcataaggcttttcac
cccaatgacccattgccgccagttgaacagcaccttttagagatgctggagatgccccgt
gtggtaaaagaaaggtgtcaggctcctcttgaaaaagtaaaagcacttttccccctaaag
gaagttgtcaagaaaaaagaagagaagactgctcaagacatcttcaaagacaatgaagat
ggacccaaccctaagaaaccaaaaattgaagatgaggaaggtagctttagcatcataaaa
cttgctgaaggcaatgtcacctctgttggcagtgttaacccaggagaagatttccgaatt
ctggtgaggcagaaaaatgctgacttcaaagatg
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