Gavia stellata (red-throated loon): 104250368
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Entry
104250368 CDS
T08384
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03020
RNA polymerase
gste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104250368
09124 Replication and repair
03420 Nucleotide excision repair
104250368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104250368
03400 DNA repair and recombination proteins [BR:
gste03400
]
104250368
Enzymes [BR:
gste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104250368
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104250368
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104250368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
104250368
NCBI-ProteinID:
XP_009805584
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagacgatgatgaaatcacccctgacttgtggcaagaagcctgctgg
atcgttattagctcctactttgatgaaaagggtttagtcaggcaacagttggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccaattgattta
caagcggaagcccagcatgccacaggagaagtggaagagccgccccggtatctgttgaag
tttgaacaaatctatctctccaaacctacacattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtggat
ataactaagacagttattaaagaaggggaggatcagttacagacacagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacatactgtttgttgaatggcttaact
gaccgtgatctttgtgaactgaatgaatgcccacttgatcctggtggctactttatcatt
aatggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtgtatgtg
tttgcaaagaaagattcaaaatatgcctacacaggagagtgtagatcttgtctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgca
aagaagagtgctattggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcataattgtctttcgtgcactaggctttgtgtctgacagggacattttagagcac
ataatatatgattttgaagatccagaaatgatggaaatggtcaaaccttctctggatgaa
gcgtttgtcattcaggagcaaaatgttgctctgaacttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtacgctaaagaagtcttgcagaaagaaatg
ctcccgcatgttggtgtcagtgacttctgtgaaacgaaaaaggcatattttctagggtat
atggttcatagattgttgctggcagcattgggaagaagagagcttgatgacagagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttcagaggaatg
tttaagaatttgctgaaggaagtgagaatatatgcacaaaagtttattgacagaggcaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggtgtatct
caggtgttaaaccgcctgacttttgcatctacgctttcccatctgagacgcctgaattct
ccaattggtagagatggtaaactagcaaagcccagacagctgcacaatacactgtgggga
atggtttgccctgctgagactccagagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggagaatctggaagaaatatctccagcagcaatagctgatgctaccaagatc
tttgttaacggctgctgggtaggaatacacaaagatccagagcagctcatgaatacccta
aggaagctccgtcgtcagatggacatcattgtgtcggaggtataa
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integrated database retrieval system
