Gavia stellata (red-throated loon): 104250380
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Entry
104250380 CDS
T08384
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104250380 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104250380 (DIS3L)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104250380 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
104250380
NCBI-ProteinID:
XP_009815477
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MQTACQAVQHQKGRRQYNKLRNLVKDARHDCAVFANEFHQHSYLPREKGESMEKWQTRSI
YNAAVWYYNHCLGQMPVVMVTEDEDAIRQYGNETEGVFVISFKNYLDNFWPDLKAAHELF
DSILQARRERESESQENNGKEYPEHLPVEILEAGIKSGRYIQGTLNVNKHRAQLEAFVRL
QGFGSKETELQSDILIYGARARNRAIHGDVVAVELLPLREWKGRTVALCENETEDKAPAD
TTGDPMPTGKVVGIIQKNWRDYVVTFPSKEESQSQGRNTQKILVTPWDYRIPKIRISTQQ
AEALQEYRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIAAILVENSICVAPFSEIQM
SEMPMSSSKNPWKVNPEEEKNRLDLRDTHLIFSIDPKGCEDVDDALSVRTLPNGNLELGV
HIADVTHFVAANSYTDVEARARATTYYLADRRYDMLPSVLSADICSLLSGVDRYAVSVLW
ELEKESYEMLQVCYNKTIIRSAYKLVYEAAQGLLDGDTSVVGDILELKNLDERTRQKQLA
ELAWAVSKLTDIARHVRAKRDSCGALELEGVEVQVQLDDKNNIHDLIPKQPLEVHETVAE
CMILANHWVAKKISEYFPHQALLRQHPPPRQEFFTELRECASAKGFSIDTRSNKALAESL
DKANDPLDPIVNKLLRSMATHAMSNALYFSTGSCPEEEFHHYGLALDKYTHFTSPIRRYA
DIVVHRLLMAATLKETKGDVKDYVFGNKDLQELCRHINNRNRAAQRAQKQSTELFQCMYF
KEETPETDERCIADGVIYSIRTNGVLVFVPRYGIKGAAYMKNKEGLVISCQGERSCEWKP
GSLHRFQNKITSTTTTGESVTLSLFDHITVKILVQTSRCHADTIKLEIIRNAPYQTSETE
VSQKNFHGVKSDLVKEVSQSAEAAQRAQEKARVEVIDEDYQEYCQTKGASLYQLLEEIRD
LALLDVSADIRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcatgtcaagctgtgcaacatcaaaaaggacgcagacagtacaacaagtta
cgaaatctagtaaaggacgcccgtcatgactgtgctgtgtttgctaatgaattccaccag
cattcttatttgccaagggagaagggagaatccatggagaaatggcagaccaggagtatt
tacaatgcagccgtctggtattataatcactgcttgggtcagatgccagttgttatggta
acagaagatgaagatgctatcaggcagtacggaaatgaaacagaaggagtgtttgtgatt
tccttcaagaattacttggataacttttggcctgacttaaaggctgcccatgaactcttt
gactctatacttcaagctcggcgtgaacgggagagtgaaagccaagaaaacaatggaaaa
gagtatcctgagcacttacctgtggaaatactggaggctgggatcaaatctggaagatat
atacagggtacactgaatgtcaataagcatagagcacaactggaagcttttgttcgactt
caggggtttggcagcaaagaaacagaacttcagagtgacatccttatttatggggccaga
gctcgaaatcgtgcaatccatggtgatgtggtagctgttgagttactacctttgcgtgaa
tggaagggaaggactgttgccctttgtgagaatgagactgaggataaagcacctgcagac
accactggtgacccaatgcccacaggtaaagttgttggaatcattcaaaagaactggagg
gattatgtggtcactttcccctctaaagaagagagccagtcccagggcagaaatactcag
aaaatccttgttacaccttgggactaccgaattcccaaaatccggatcagtacgcagcaa
gctgaagccttacaggagtatagagttgtcgtgcgtattgattcttgggaatcaacttct
gtgtatccaaatggacacttcgtgagagttctaggaagaattggagatcttgagggggaa
attgcagctattctggtggagaacagcatctgtgttgcccctttctcagaaatccagatg
agtgaaatgcccatgagttcgtcaaagaatccatggaaagtgaatccagaggaggaaaaa
aaccgccttgacttgagagatacgcacttgatattcagcattgacccaaaaggctgtgag
gatgtggatgacgcgctctccgttagaactctgcctaatgggaatctagagttaggtgtc
cacattgcagatgtaacccattttgtggcagcaaattcttacactgacgttgaggccaga
gcaagggcaacaacttattatttagcggatcgtcgttacgacatgctgccctccgtcttg
agtgctgacatatgctctcttcttagtggagttgataggtatgctgtaagtgtcttgtgg
gaactagaaaaagagtcatatgaaatgctgcaagtctgctacaacaagaccatcattcga
tctgcgtacaagctagtttacgaagcagcacagggattattagatggagacacaagtgtt
gttggtgatatcctggaactgaaaaacttggatgaaagaactagacagaagcagctggct
gaactggcctgggcagtatcaaaactcaccgatatagcacgacacgttagagctaagcgg
gacagctgtggtgctctggaactagaaggggtagaagtccaagtgcaactggatgataaa
aataatatccacgatctcatccccaagcaaccgctggaggtgcacgagactgttgcagaa
tgtatgattcttgccaaccactgggtggcaaaaaagatttcggaatactttcctcatcaa
gctttgttgcgtcaacaccctccaccacgacaggaattttttactgaactacgagaatgt
gccagtgccaaaggtttctcaatagacacacggtctaacaaagcattggctgagtccctg
gataaagcgaatgacccgttggatccaattgtaaataagctgttgcgatctatggccact
cacgcgatgtctaatgcattgtacttctcgactggctcttgtcctgaggaagagtttcat
cattatgggcttgcgttagataagtatactcatttcacttctccaattagaagatatgct
gatattgttgtccacagactcttgatggcagcgactctgaaggaaactaaaggcgatgtt
aaggattatgtatttggtaataaggatcttcaggaattgtgcagacacattaataacaga
aaccgggcagcccagcgtgctcagaagcagtctactgaactcttccagtgcatgtacttc
aaagaggaaaccccagaaacagatgagcgctgcatagcagatggtgttatttactcaatt
cgaacaaatggtgtgcttgtttttgtaccaaggtacggaatcaaaggtgctgcatatatg
aaaaacaaagaaggcttagtcatctcttgtcaaggtgagaggagctgtgagtggaagcct
ggatcacttcatcgctttcagaataaaattacttccactacaaccactggagaatcagtt
acattaagccttttcgatcatattacagtgaaaatacttgtgcagacttcccgctgccat
gctgacacgatcaagcttgaaataatcaggaacgcaccataccagacttcagagacagaa
gtttcccagaagaattttcatggggtgaaatctgacttggtaaaagaagtcagtcagtct
gcagaagcagctcagcgtgcccaagagaaagcaagagttgaagtgattgatgaagactat
caggagtactgccagaccaagggagcaagcttataccagctgctggaggagatcagggat
ttggctctattagatgtttcagctgacattagaacttga
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