Gavia stellata (red-throated loon): 104250527
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Entry
104250527 CDS
T08384
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gste03016
]
104250527 (TRMT13)
Enzymes [BR:
gste01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104250527 (TRMT13)
Transfer RNA biogenesis [BR:
gste03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104250527 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
OrgC
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
104250527
NCBI-ProteinID:
XP_009812508
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
VENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFIQDINAGLKDTAEIPEKQV
AISSLSKEELDNLITKLKKASNGLELCLKEQILSHQALQEALNDPKNGESAFKHLKQQAS
ILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDVALQNVEDVQFLLVERATTRFKVDGKHK
RRDSIFERLQVDIQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDR
ENEEPAPKRSRNDKTEVASNNSADNESNKEGCKPVAGIVIALCCHHKCDWTHYVGKDFFK
SVGLGPVEFHYFQRMSSWATCGMQETTPKASTIEESEDQTNDTEEHEQTFSKTESGSDTL
QGILTVEERKEIGCLCKLLIDYGRIEYLQQRGYKAALQYYTESAVSLENVLLTAIPSPSL
IPEPTT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtagaaaatgacagaaaaagaattccatgtcctcttgatccaaaacacactgtatatgaa
gaccaactacaaaaacatttaaaaaaatgtaattcaagagagaagccaaagccagtctac
ttcattcaagatattaatgcaggtttaaaagatacagcagaaataccagaaaaacaagta
gctatctcttctctatccaaagaagagctggataacttaattaccaagttgaaaaaagca
agtaacggcctggaactttgccttaaggaacaaatactgtctcaccaggctttacaagaa
gccttaaatgacccaaagaatggggaatctgctttcaaacacttgaaacaacaggcttct
attttaggtaacatggaaaaattacatttacttggtccaggaagatgttttgttgagttt
ggagctgggcgaggaaaactatctcactgggttgatgttgccttacagaatgttgaagat
gttcagtttttgcttgtggaaagggcaactacaagattcaaggtggatggaaaacataaa
aggagagattctatatttgaaagacttcaagttgatattcaacacttatgtttaaataag
gtacctattttggagaagaaaaaactaccagtggtaggaattgggaagcatttgtgtggt
gctgcgacagatcttgctttgagatgcttggttgaaagttatacaacttgctgtgataga
gaaaatgaagagcctgcaccaaaacgctctaggaatgataagacagaggtggcttctaac
aattctgctgataatgaaagcaacaaagaaggctgtaagcctgtagctggaattgttatt
gctttgtgctgccatcacaagtgtgactggacccattatgtaggtaaagacttctttaaa
tcagtaggacttggaccagtagaatttcattattttcagagaatgagtagctgggccact
tgtggcatgcaagaaaccacacccaaagcctctacaattgaagaaagtgaagatcaaact
aacgacacagaagaacatgagcaaacattcagcaagacagagagtggttctgatacttta
caagggatacttactgttgaagaacgaaaggagataggttgcctctgtaaactgctgatt
gattatggacggattgaatatttacaacaacgaggatacaaggctgcactacagtattat
acagagtctgctgtgtccttggagaatgtcctgttgacagctatcccaagtccatctttg
ataccagagccaactacatga
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