Gavia stellata (red-throated loon): 104250766
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Entry
104250766 CDS
T08384
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03430
Mismatch repair
gste03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104250766 (MLH1)
03460 Fanconi anemia pathway
104250766 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104250766 (MLH1)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104250766 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Hfx_Cass5
Motif
Other DBs
NCBI-GeneID:
104250766
NCBI-ProteinID:
XP_009807197
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
LDAKSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASIATYGF
RGEALASISHVAHVTVTTKTADAKCAYRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNV
NTRRKALKNPNEEYAKILEVVSRYAIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRSI
FGNAVSRELIEVGCEDASLAFKMKGYITNANYSVKKCIFLLFINHRLVESAALRKAIETV
YAAYLPKSTHPFLYLSLEIAPQNVDVNVHPTKHEVHFLHEDSILECVQQHVESKLLGSNS
SRMYFTQTLLPGADCSSSEVVKSAANSSVVTKGTSDKVYAHQMVRTDSREQKLDAFLQPV
NNPLSTGPSEATTEVNAGPPEGSVRPQDAEMEDVSDLVEMADVQDTVMPGRLSESGRLSP
ETVPPRKRPREDVDVEMEKDDTRKDMTAACTPRRRIINLTSVLTLQEEISNQAHANLQEM
LHDHSFVGCVSPQWALAQYQTKLYLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYE
LSMLALEDPESGWTEDDGPKEGLAEYIVEFLKKKTEMLKDYFSLEIDEEGNLIGLPLLID
NYVPPLEGLPMFILRLATEVNWDEEKECFESLSKELAMFYSIRKQYIIDEANLTNSQNED
SDSGSTTWKWTVEHVLYKAFRTHLLPPKHFTEDGNILQLANLPDLYKVFERC
NT seq
2140 nt
NT seq
+upstream
nt +downstream
nt
cttggatgctaaatctacgagtatccaggtagtagttaaagaaggtggtctgaagctcat
ccaggtccaagataatggctgtggtatcagaaaagaagatctggacattgtatgtgagag
atttactaccagtaaactgcaaaaatttgaagacttggctagtattgccacttatggttt
taggggcgaggcattggctagcatcagtcatgttgcccatgttacggtaacaactaaaac
agctgatgcaaagtgtgcatacagagctacttacagtgatggaaaaattaaagcccctcc
aaaaccgtgtgctggaaaccagggaactcagatcacggttgaagatctcttttacaatgt
aaatacaaggaggaaagctttaaaaaatccaaatgaagaatatgcaaaaatactagaagt
tgttagcaggtatgccatccataactcgggcatcagcttttcagttaaaaagcaaggtga
taccgtgtcagatgttagaaccttatcaaatgcctcaacagtggacaacattaggtccat
ctttggaaatgcggttagcagggaactgatagaagtgggctgtgaagatgcaagtctggc
ctttaaaatgaaaggctacatcacgaatgcaaactactctgtgaagaaatgtatattttt
actcttcataaaccatcgattggtagaatcagccgctttacggaaagccatagaaactgt
gtatgctgcttatttgccaaaaagcacacatccattcctgtatttaagcctagaaatagc
cccccagaatgtagatgtgaatgtgcaccctacaaaacatgaggtccatttccttcatga
agatagtattctagagtgtgtgcaacaacatgtagagagcaagttactgggctctaattc
ttcaaggatgtacttcactcagacattgcttccaggggccgactgttcttccagcgaggt
tgtaaaatcagcagcaaactcttctgtggttaccaaaggaaccagtgataaagtttacgc
gcatcagatggtccgcactgattcccgagagcagaaactggatgcttttcttcagccagt
gaacaatcccctaagtacaggccccagtgaagcaacgacagaggttaatgcaggacctcc
agagggttcggtcaggccacaggatgctgaaatggaagatgtcagtgatctagttgaaat
ggctgatgttcaggacacagtgatgcctgggaggctgagtgagagtggacgcttgtctcc
tgagacagtgcctcctcgaaagagaccacgggaagacgtggatgtagaaatggagaagga
tgacaccagaaaggacatgacggctgcctgcacccctagaagaagaattatcaacttgac
tagtgtattgactctccaggaggaaattagtaaccaggcacatgcaaatcttcaggagat
gctacatgatcactcatttgttggctgtgtcagtccccagtgggctctggcccaatatca
gacaaaactgtatcttctcaatacaacaaaactcagccaagaactcttctaccagatact
tatttatgactttgcaaactttggagtcttaaggctgtctgagccagctcctttatatga
gctttcaatgcttgctttagaggatcctgaaagtggctggacagaagatgatggcccaaa
agaagggcttgcagagtacattgtggagtttctgaaaaagaagactgaaatgctgaaaga
ttatttttctcttgaaattgatgaggaaggaaaccttattgggctaccacttctgataga
taactatgttccgccgctggaaggactgcctatgtttatccttcgcttggccacagaggt
aaactgggatgaagaaaaggagtgttttgaaagcctaagcaaagaattagctatgttcta
ctccattagaaagcaatatataatagatgaagccaacttgacaaactctcagaatgaaga
ttctgactctggttcaacaacatggaaatggactgtggaacacgtactttacaaggcttt
taggactcatcttttacctcctaaacacttcacagaagacggcaacattttgcagcttgc
taacctgcctgacctatataaagtttttgagagatgttga
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