Gavia stellata (red-throated loon): 104250839
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Entry
104250839 CDS
T08384
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104250839 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gste04147
]
104250839 (COPB2)
Membrane trafficking [BR:
gste04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104250839 (COPB2)
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104250839 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104250839
NCBI-ProteinID:
XP_009819612
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR
AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM
LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL
EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPEL
PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR
EEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHN
PNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKEK
KSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIAT
EESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVN
RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRR
DFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQLA
VEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAEK
DGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVN
QKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAKG
FEPSGVMAPQKKAEEPVPSPKPEAMKTVLQNSDLLPTRDQKTLLDLEDDLDNLDLEDIDT
TDINLDEEILDE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
cctctccgacttgatataaaacggaaactaacagcccggtctgaccgggtgaagagtgta
gacttgcatcccacagaaccatggatgttggctagcctttacaatggcagcgtctgtgtt
tggaaccatgaaacacagactctggtgaagacttttgaagtgtgcgacctgccagtgaga
gctgccaaattcgtggcaaggaagaactgggttgttacaggagctgatgacatgcaaatt
agagtttttaattacaacaccttggaaagagttcacatgtttgaagcacattcagattac
attcgttgtattgctgtgcatcccacacagcctttcatactgacaagcagtgatgacatg
ctcattaaactctgggactgggataaaaaatggtcttgttctcaagtgtttgaaggacat
acccattatgtcatgcagattgtcataaacccaaaagacaataatcagtttgccagtgcc
tctttggataggacaatcaaggtgtggcagcttggatcttcttcacccaactttactttg
gaaggccatgagaaaggagtaaactgcattgactattacagtggaggagacaagccgtat
ctcatttcgggtgcagatgaccggttggttaagatctgggactaccagaataaaacatgt
gtacaaacactggaaggacatgctcaaaacgtgtcgtgtgtcagcttccatcctgaattg
cctatcattatcacaggctcagaagatggaacagtgcgcatctggcattcaagcacttac
cgcctggaaagtaccctcaactatggtatggagagagtgtggtgtgtggccagtttgaga
ggatccaataacgtggctttgggatatgatgaaggcagcattattgttaagcttggtcgt
gaagaacctgccatgtccatggatgcaaatgggaaaattatttgggctaagcattcagaa
gtccaacaagctaacttgaaagctatgggagatgctgaaatcaaagatggagaaagattg
ccgctggctgtaaaggatatggggagctgtgaaatctatcctcagacaattcagcacaac
cctaatggacggtttgtagtagtgtgtggtgatggtgaatacataatctacacagctatg
gctctgagaaacaagagctttggttctgcacaggagtttgtatgggcacatgattcttca
gaatacgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagagaag
aagtcattcaaacctgattttggagcagaaggcatctatggtggcttcctgctgggcgtc
agatctgttaatggtttggcattctatgattgggaaaacacagaactgattcgcagaatt
gaaattcagcccaaacatattttctggtctgactcgggtgagcttgtctgcattgctaca
gaagagtcattcttcattctgaaatacctatcagaaaaagttgcagcagcccaagaaaca
catgaaggtgtcactgaagatggaattgaagatgcttttgaggttcttggtgagattcag
gagattgtgaaaacaggcttgtgggtaggagactgctttatttacaccagttctgtgaac
agactcaactactatgttggaggtgaaattgtcaccattgcccatttagacagaacaatg
tatcttttggggtatatccctaaggacaaccggctttatttgggtgataaggagctaaac
attgttagctactctttgctggtctcagtgcttgaatatcaaactgctgtgatgagaaga
gatttcagtatggctgacaaagttcttcccacaattccaaaagaacagagaaccagagtt
gcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtgtctacagatcca
gagcatcgttttgaacttgctcttcaacttggagaattaaaaatagcgtatcagcttgca
gtggaagcagagtcagaacagaaatggaagcaacttgctgagcttgccatcagtaaatgc
cagtttggcttagcccaggagtgtctccaccatgcacaagactatggaggacttctgctc
ctggccacagcttcaggaaatgctaacatggtgaataagttagctgaaggagcagaaaaa
gatggcaagaacaatgttgcatttatgagctacttcctgcagggaaagctcgattcatgt
ttggaactcctgattaaaaccgggcgtctcccagaggctgcttttcttgcacggacatac
ttgccaagccaagtttcgagggttgttaaactgtggcgggagaatctctctaaagtaaat
caaaaagctgctgagtcccttgctgatcctacagaatatgaaaatcttttccctggatta
aaggaagcttttgttgctgaagaatatgttaaacaaagtcttgctgacttgcgaccagcc
agggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaaggc
tttgagccttctggagtaatggcacctcagaagaaggctgaagaaccagttccatctcct
aaaccagaagcgatgaagacagttttgcagaattctgatctacttccaacaagagatcaa
aagacactgctggacttggaagatgacttagataacttggatctggaggatattgatacc
acagatatcaatctggatgaagagatcttagatgagtga
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integrated database retrieval system
