Gavia stellata (red-throated loon): 104250842
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Entry
104250842 CDS
T08384
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104250842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104250842
03036 Chromosome and associated proteins [BR:
gste03036
]
104250842
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104250842
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104250842
Chromatin remodeling factors
BAF complex
104250842
PBAF complex
104250842
GBAF(ncBAF) complex
104250842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
ResIII
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
104250842
NCBI-ProteinID:
XP_009809180
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MTIRNPMEKDLGAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKE
KKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKVLLGPEAPKAS
QLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDPNSEDVSEKDA
KQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTLKHYQLQGLEW
MVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDK
WAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH
RMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN
APFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQ
KILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLG
YSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYL
RLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDL
QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR
AFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRL
MEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcaaccctatggagaaggacttgggggctgaagatgaagaaggctaccgt
aagctgattgaccaaaagaaagatagacgcctggcctacctgttgcagcagacagatgag
tatgtggctaacttgactaacctggtatgggagcataaacaggcacaagcagccaaagag
aagaagaagagaaggagaagaaagaagaaggctgaagaaaacgcagaaggaatggcatct
ggtcttggtcctgatggagagcccatagatgagagcagtcagatgagtgaccttccagtc
aaagtgactcacactgaaacaggcaaagttcttcttgggccagaagcaccaaaagcaagt
cagctggatgcttggctggaaatgaaccccggctatgaagttgctcctaggtcagacagt
gaagatgaaagtggctccgaatatgaggaagaggatgatgaagaagaatcaagcaggtta
gaagcagatgagaagatactcctggatcctaacagtgaggatgtttctgagaaagatgca
aagcaaatcattgagacagccaaacaagatgtggatgatgaatatagcatgcaatatagt
gccagagggtctcagtcctactacactgttgctcatgctatcacagaaagggtggaaaag
cagtcttctcttctgattaatggcacactaaaacattatcagctccagggactggaatgg
atggtttcactctataataacaatctcaatggaattttagctgatgaaatgggactagga
aagacaatacagactattgcactcatcacttacctgatggagcacaaaagactcaatggc
ccctatctcatcattgttcccctttcgactttatccaattggacatatgaatttgacaaa
tgggctccttctgtggtgaagatatcttacaagggtacaccggcaatgcgccgctcactt
gttcctcagcttcgaagtggaaaatttaatgttcttttaactacttatgagtacataata
aaggacaaacatatccttgctaagattcgatggaaatacatgatagtagatgaaggccat
cgaatgaagaaccatcactgcaaactgactcaggtcttgaatactcactatgtggcccct
aggcgaatactgctgactgggactccattgcagaacaaattgcctgaactttgggctctt
ctcaatttcctcctcccaaccattttcaagagctgtagcacctttgaacagtggttcaac
gctccatttgccatgaccggagaaagggtggacttaaatgaggaagaaactattctgatc
atacgtcgtctccataaagtgctccgacccttcttgctgagaagattgaagaaagaggtt
gagtctcaactgccagaaaaggtggaatacgtgatcaaatgtgatatgtcagctcttcag
aagatcctgtaccgtcatatgcaagccaagggaatccttctcacagatggttctgaaaaa
gacaagaagggaaaaggtggggcaaaaactcttatgaacactatcatgcaattgagaaag
atatgcaatcacccatacatgtttcaacacattgaggagtccttcgctgaacatttaggc
tactcaaatggtgtcatcaatggagccgaactttatcgggcctcagggaagtttgagcta
ctcgatcgtattctaccaaagttacgagctactaaccatcgtgtgcttcttttctgtcaa
atgacatcactcatgaccattatggaagactactttgcctttcgaaatttcctttacttg
cgtctcgatggcacaacaaaatcagaggatcgagctgctctgttgaagaagttcaatgaa
cctgggtcacaatactttatcttcttgctcagtacaagggctggagggctaggcttaaat
ctccaggctgctgatactgttataatctttgatagtgactggaatcctcaccaggacttg
caggcccaagatagagctcaccgaattggtcagcagaatgaagttcgagttctgcgacta
tgcactgtgaacagtgtggaagagaagatacttgctgctgcaaagtataagctgaatgta
gatcaaaaagttattcaggctggaatgtttgatcagaagtcttcaagccatgaaaggaga
gcctttctacaggctatattggagcatgaagaagaaaatgaggaggaagatgaagttcct
gatgatgagactctgaatcagatgattgctcgacgtgaggaggaatttgatctttttatg
cgcatggacatggaccgtcgcagggaggatgccagaaaccccaagcgtaagccccgcttg
atggaggaggatgaactaccatcctggattattaaggatgatgctgaggttgaaaggctt
acgtgtgaagaagaagaagagaaaatatttggaagaggatcccgtcaacgcagggatgtg
gactacagtgatgctctcacagagaaacaatggctgcgg
DBGET
integrated database retrieval system
