Gavia stellata (red-throated loon): 104250998
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Entry
104250998 CDS
T08384
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104250998 (SOX30)
Transcription factors [BR:
gste03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104250998 (SOX30)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104250998
NCBI-ProteinID:
XP_009815865
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All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MGNGKEPWRESAVKAEPSVTAFEACRVKMEKDDAPAASPGGLAHTSTNEGKAQLCEGFGT
LPEDLKVPVVLHPLPPGTLIQIQGPLPSELIHVTKVPVKQVPLKMQSLLQPSVKIETKNV
PLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGL
EWSKLTEEQKQPYYDEAQKIKQRHREEFPGWVYQPRPGKRKRFPLPVSAVFSSTSQSIIP
TNPAGICPFQSPAYSLVIPNVKNSIGHPACEAPSAIHLPASSIQHAGPITVFQTTSASTT
SLAVPAPTLPLRPVISPQHFAEPAQTAALDVSSGLNCSLKTPTPVFIESFSRNLSSITTT
NGIFSVSNSEPPKEYPGVSIFPRGVPLPQATPILHSHLYQSPPIGQPASLFGVPPRFSFF
HPYFVPGPHYFPSSTCPFSRPPFGYGNFSSSVPECLGFYEDRCQRQEVMFSALDGDCPFQ
EYPEESICENNRSCESLEAASSHSSCNEERYLSPLPQLDIGALEEVLSATPSTPSSIHLI
NVTDSDEEELKLLREL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgggaaggagccctggagagaaagtgctgtcaaagcggagccgtctgtcacg
gcctttgaggcctgcagggtgaagatggaaaaggacgatgccccggctgcctccccgggt
ggccttgctcacaccagcaccaacgagggcaaggcgcagctgtgtgaggggtttgggacc
ctccctgaagatctgaaggtcccagttgtgcttcaccccttaccccctggcaccctcata
cagatccaaggccctctgccatcagagctgatccatgtgactaaagtgccggtgaaacaa
gtgccgcttaaaatgcagtctttactgcagccttcagtaaagattgaaaccaaaaacgtt
cccctcacagtactgccctccgattcaggtatgccagatactccatttagcaaggacaaa
agtggccatgtaaagcgtccaatgaacgcatttatggtgtgggctaggattcatcggccc
gctctagcaaaagctaacccagctgccaataatgcagaaatcagcgttcagcttggattg
gagtggagcaaactgactgaagagcagaagcagccctattatgatgaagctcagaaaata
aaacaaagacacagagaggaatttcctggttgggtttatcaaccacgaccaggcaaaagg
aagcgttttccactgcctgtctctgctgtattttccagcacttctcagagtatcatccct
acaaatccagctggcatttgtcccttccagtcacctgcttactctcttgtcatccccaat
gttaagaacagtattggacatccagcctgtgaagctccttctgccatccatctgccggct
tcttccattcaacatgctggtccaattactgttttccagactactagtgcaagcaccaca
tcattggctgttccagctccaacgctgcccctgcgccctgtaatttcaccacagcacttt
gctgaacctgctcagacagccgctctcgatgtatcatctgggctcaattgctctctgaag
acacctacaccagttttcattgagagcttcagcagaaacctaagtagcataaccaccact
aatggcatattttctgtctctaatagcgagcccccaaaggagtacccaggggtttctatt
tttcctagaggtgtacctcttccccaggctacccctattcttcactcacatctctatcag
tctccccccattggtcagccggccagtctgtttggagtacctcctcggttttcatttttc
cacccttactttgtacctggacctcactatttcccctcaagcacatgcccattcagccga
cctccatttggctatgggaatttctccagctcagtgcctgaatgccttggcttttatgaa
gacaggtgccaaagacaggaggtgatgttttcagctctggacggagactgtcctttccag
gaatacccagaagaaagtatatgtgagaacaaccgcagctgtgagagccttgaagcagcg
tccagtcacagcagctgcaatgaggagcggtatttaagccccctaccacagctggatatt
ggagccttggaggaggttttgtcagccaccccatccactccctccagcatccacctaatc
aatgtaactgacagtgacgaggaagaattaaagttgttgcgagaattgtaa
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