Gavia stellata (red-throated loon): 104251135
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Entry
104251135 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03430
Mismatch repair
gste03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104251135
03460 Fanconi anemia pathway
104251135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104251135
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104251135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104251135
NCBI-ProteinID:
XP_009813316
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
LQPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDHGAELIEV
SDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKS
AKVGTRLVFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKVGICKNGPX
YCRHTVLFQXGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLIPFVQLP
PDEAVCEEYGLNSTDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLV
NEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLMEMFGSD
VNKLNVNQKLLDIAGRTQNVKTLPEETEKPQVEMLPDSETENPSGEGKRIMSLARLRESF
SLHQTTESSFQSPKKVKQQHSSPRQTSLDTTLSTVKTQKAVLTKESESCHKMDSKMSIPS
RSLRKLEDNADSGFCSTSESDAGCSTPEAGSCVNSEGGINPPEEEFCSSEEQLQNECLKT
VGGSEKPLECDVQVLGAEHKLNQVNDGANRNKLSQEASSSSSRVKCFKSRSFKSEADDFK
AGKCPEVKNTRNYMASVDVLVEVKKKTVPLEFSMKVLAEKVKKVIQQQQKSTETQNYRRF
KAKISPGENKVAEDELRKEISKEMFAKMEXHWPVXFRIYNSKVESDLFIIDQHATDEKYN
FEMLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLI
SLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMR
KLITHMGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2626 nt
NT seq
+upstream
nt +downstream
nt
cctgcagcccgccaaagccatcaagcccatcgaccgtaagtccgttcatcggatctgttc
gggacaggttgtgctgaatcttggcactgccgtgaaagagttggtggaaaacagcctgga
tgctggagctaccaacattgatataaaacttaaagatcatggagcagaactgatagaggt
ttcagataatggaggtggagtggaagaggaaaacttcgaaggcttgactctgaaacatta
tacatcaaagatacaagatttttctgatctaatacatgttgaaacatttgggtttcgagg
tgaagctctgagttcactgtgtgcattaagtgatgttaccatttttacctgtcataagtc
tgcaaaggttgggactcgtttggtatttgatcacaatggtaaaattactcagaaaactcc
ttttccacgacaacaaggaacaactgttaacatacagcagttattttatactttgccggt
gcggcataaggaatttcaaagaaacattaaaaaggtaggaatatgcaaaaatggtccang
ctattgcaggcatactgtattgtttcaanaaggagtgcggattaactgcactaatcaagt
tggccaagggaaaaaaagctctgtggtatccactactggaagtcctagtttaaaggaaaa
cattggagcagtatttgggcaaaaacagttgcagagcctcattccttttgttcagctacc
tcctgatgaagctgtttgtgaagaatatggactcaactctactgacatgccacaaaatct
ttatagtattacaggcttcatttctcgttgtgatcatggtgttggaaggagtacaacaga
cagacagttcttctttatcaaccaacgtccatgtgatccagcaaaggttgtcaagcttgt
gaatgaagtttatcacttatacaataaacatcagtatccatttgttgttcttaacatttg
tgttgattctgagtgtgttgacatcaatgtaactccagacaaaaggcaaattttacttca
ggaggaaaagcttttattagcaattttaaaaacttctctgatggagatgttcggtagtga
tgttaacaaactgaatgtcaatcagaaacttctggacattgcaggtaggacacaaaatgt
gaaaacgcttcctgaagagacagaaaagcctcaggtagaaatgctgcctgactccgagac
tgaaaatccaagtggcgaaggaaaaagaataatgagtcttgccagattaagggagtcgtt
ctctctccatcaaacgacagagagtagttttcaaagccctaaaaaggtaaaacagcagca
cagctcccccagacaaacatcacttgataccacattgagtactgtaaagactcaaaaggc
tgtcttgactaaggagtctgaaagttgtcataagatggactcaaagatgtcaattccaag
cagatctttgagaaaattagaagataatgcagattctggattctgtagcacttccgagtc
agatgccggatgtagtacaccagaagctgggagctgcgtcaatagtgaaggtggaattaa
tcctcctgaagaagaattctgtagctcagaagaacaacttcaaaatgaatgtcttaaaac
tgttggaggtagtgagaaaccattggaatgtgatgttcaggtcttgggcgctgaacataa
gttaaatcaagtgaatgatggggctaatcgaaataagttatctcaagaagccagtagttc
ttcctcaagagtaaaatgttttaaaagcagaagctttaaaagtgaagcagatgacttcaa
ggcaggtaaatgtcctgaagtgaagaatactaggaactatatggcaagtgttgatgtact
ggtggaagttaaaaagaaaactgtgcctcttgaattctctatgaaggttttagcagaaaa
ggtaaaaaaggtaattcagcaacaacagaaaagtacagaaacacaaaattacagaagatt
taaagcaaaaattagtcctggagaaaataaagtagcagaagatgaattaagaaaagagat
cagtaaagaaatgtttgcaaaaatggaanatcattggccagtttaatttaggatttataa
tagcaaagttgaatctgatcttttcataattgaccaacatgctactgatgagaaatacaa
ctttgagatgttacaacaacacactgttcttcaaggtcagaagctgattgtgcctcagaa
tctcaatttaacagctgtaaatgaaactgtattgattgaaaacctggaaatattcagaaa
aaatgggtttgattttgtcataaatgaaaatgctcctgtaactcaaagagttaaattaat
atcattaccaacaagcaaaaactggacttttggtccacaagatatagatgagctgatctt
catgttaagtgactgccctggagtcatgtgtaggccctccagggtcagacagatgtttgc
ttctcgagcttgcagaaagtctgtgatgattggaactgcactgaatgtgcaggaaatgag
aaaactgatcacccatatgggtgagatcgagcatccctggaactgcccccatggaaggcc
tactatgagacacatagtcagtttagacttgatttcaccagaataa
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