Gavia stellata (red-throated loon): 104251285
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Entry
104251285 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104251285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104251285
03021 Transcription machinery [BR:
gste03021
]
104251285
Transcription factors [BR:
gste03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104251285
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
104251285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
104251285
NCBI-ProteinID:
XP_009809728
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
FVQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLS
SPSALNSPGLGVEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSDEITMIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPCPTSLVATTPSLVTSSAATTLTVNPV
LPLTSPAVTSLSVTGTTETTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSAS
ETSTTQTTSAPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPG
LMASSQFAAGGALLSLNPGTLGGALSPALMSNSTLATIQALASGGSLPITSLDATGNLVF
ANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASAGASGPVASLHAHLSXQNSLLT
VASASGATSTTTTASKAQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
tttgtccagggtgatgttgggctcgctatgggcaaactctatggaaatgacttcagccaa
actaccatctctcgctttgaagccttgaacctcagctttaagaacatgtgcaagttaaag
ccacttctggaaaagtggctcaatgatgcagaaaacctctcatctgattcaactctctcc
agcccaagtgccctgaattccccagggctgggggtcgaaggcttgaaccgtaggaggaag
aaacgcaccagcatagagaccaacatacgtgtggccttagagaagagtttcctggagaac
caaaagcctacctcggatgagatcaccatgatagctgaccagctaaacatggagaaggag
gtgatccgcgtttggttctgtaaccggcgccagaaggagaaaaggatcaacccacccagc
agtggtggaaccagcagctcgcccatcaaagcaattttcccttgcccaacctcactggtg
gcaaccacgccaagccttgtgactagcagtgcagctacaaccctgactgtcaatcctgtg
ctccctctgaccagtcctgctgtaactagtctgtcagtcacaggcacaacagaaaccacc
tccaacaacacggcaacagtgatttcaacagcacctccagcttcttcagcagtgacatca
ccctccctgagtccttccccttctgcctcagcctccacttcagaggcatccagtgccagt
gagaccagcacaacacagacaacctccgctcccttgtcctcccctcttgggaccagccag
gtgatggtaacggcatcagggttgcaaacagcggcagcagctgcgttacaaggagctgca
cagttgcctgcaaatgcaagtcttgctgccatggctgctgcagcaggactaaacccaggc
ttgatggcatcctcgcagtttgcagctggaggtgccttactcagtctcaatccagggaca
ttaggtggtgctctcagcccggccttgatgagcaacagtacactggcaactattcaagct
cttgcatctggtggctctcttccaataacatcactggatgcaactggaaacttggtgttt
gccaatgctggaggtactcctaacatcgtaactgcccctctgttcctgaaccctcagaac
ctttctctgctcaccagcaacccagttagcttggtctctgcagctgcagcctccgcaggg
gcctctggaccagtcgccagccttcatgcccacctcagcncccagaactctctcctcaca
gtggcctctgcgagtggggccacgtccaccaccactactgcctccaaggcacagtga
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