Gavia stellata (red-throated loon): 104251286
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Entry
104251286 CDS
T08384
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gste03016
]
104251286 (TSEN54)
Transfer RNA biogenesis [BR:
gste03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104251286 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
HOOK
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104251286
NCBI-ProteinID:
XP_009819525
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MHRQQAAVAYGQMGRLVKAEWKPGQGIVELQSPAGKFWHTMGFTERGKQCLLPEEALYLL
ECGSVQLFYRDLPLSIQEAYEILLSQEAMSLPHYQVFSHLKQLGYVVLRFDPSTVLSPYE
RQLNLESHCQSSGKHHRKRRRSSSPRLHEKKHKVSEDLPEAEGTSKKAGDDCGDSICLPM
DADAKPLSEQPKESDAAGGEGESDPVPLDTGQKDSLSPSRGRPGDLKESTTGTRAPRWDF
TTIILPNVAPDQPCTHLPSPDNGLLPENVPGREVDAASWCARINQKQEKLSRKEREQRER
ESRYKSSVNADREVRCCSSWQEYKALLERRSQQRIWRRPPHLWDQAVTPLLWPDEATSSA
ALLQQISVLQPSHILDGASRLQEDPDSMKIDFNVYQADAVAKFKKTNPGKPYVRMCVRSF
DEQIPSLRALKQVTYQSGDVPVVFALVDHGEIAFYSLKEFKLPVDVYH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgccagcaggctgctgtagcctatggacagatggggagactggtgaaagctgag
tggaagcccggacagggcatcgtggagctgcagtcccctgcggggaagttctggcacacc
atggggttcacagagcgtggcaaacagtgcctgctgcccgaggaagctctgtacctgctg
gagtgtggctctgttcagctcttttacagagatctacccttgtcaatccaggaagcctac
gagatcctgctgtcccaggaggcaatgagcctgccacattaccaggtgttcagccacttg
aagcaactgggttatgttgtactgagattcgaccccagcactgtcctgtcaccctacgag
aggcaactgaacctggaaagtcactgccagagctctgggaaacaccatcgcaaaaggagg
aggagttccagcccccggttgcatgagaagaaacataaggtatctgaggaccttccagaa
gctgaagggacctccaaaaaagctggagatgactgtggagactctatctgccttcccatg
gatgcggatgcaaagcccttgtcagagcagccaaaggaatcggatgctgccggtggagag
ggggagtcagacccagttcctcttgatacaggacaaaaggactccctgagcccctccagg
ggccggcctggagacctcaaggagagcaccactggcacccgtgcaccccgctgggatttt
accaccatcatcttgccaaacgtggccccagaccagccgtgcacacatctgccctcgcct
gacaacgggctcctgccagagaacgtgccagggagggaggttgatgcagcttcctggtgt
gcacgcatcaatcagaaacaggagaagctgtcacggaaggaaagggagcagcgagagagg
gagagcaggtacaagagcagtgtcaatgctgaccgggaggtgaggtgctgctccagctgg
caggaatacaaagcccttttagagcggaggagccagcagaggatttggagacgaccgccg
catctctgggaccaagctgtcacaccgcttttatggccagatgaagctacctcatcagct
gcgctcctccagcagatcagcgtgctgcagccctcccacatcctggatggagcctcccgg
ctgcaggaggacccagacagcatgaagatagacttcaatgtgtatcaggcagatgctgtg
gctaagtttaagaagacaaaccctgggaagccgtatgtcaggatgtgtgttcggagcttt
gacgagcagattccatcccttcgggctttgaagcaggttacgtatcagagtggggacgtc
ccggtggtctttgcgctggtggatcacggagaaattgccttttattcactaaaggaattc
aagctgccagttgatgtttatcactaa
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