Gavia stellata (red-throated loon): 104251290
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Entry
104251290 CDS
T08384
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03013
Nucleocytoplasmic transport
gste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104251290 (PNN)
03015 mRNA surveillance pathway
104251290 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104251290 (PNN)
03041 Spliceosome [BR:
gste03041
]
104251290 (PNN)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104251290 (PNN)
Spliceosome [BR:
gste03041
]
Complex C
Other components
EJC/TREX
104251290 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104251290
NCBI-ProteinID:
XP_009809793
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
LSRRPPQNRLLAITGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAASRLGGERRTRR
ESRQESDAEDDDIKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQ
KFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVE
LAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEF
AEQINKMEARPRRQSVKEKEQQEVQNEEKKEEQNKEQEEGKVAQQVEELETGNQHNDVEM
EEVGEEKGKTGSGHSDAEKEQEEDEQKHEMEIKVEETTEVRENDKQQDGQHEKVTVVKEE
SESIQPVDNEQDVAEMNEADSVEPVENEHGKEVETETECDAQPEKVCNVPSPEKEKGIKP
EIEAEPEEKQEKAPEAQPEPVAEALSQPQSVPLPQSPQLSQSTQDTEPQADKDENAVVSV
KLVEAQTEQGQTPSVEIKSKTRSRSRGRAGNKTGKSHSRSSSSSSSSSTSSSTSSGSSST
TGSSSSRSSSTSSSTTSGSTSRDSSSSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDA
SGVDRSHKSSKGGSRDTKSSKDKSSRSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ctctctcgcaggccccctcaaaacagactgttagccatcacaggccctggtggaggtaga
gggcgtgggagcttattgctaaggcgtggattctcggatagtggaggaggacccccagcc
aaacagagggatcttgaaggggcagccagtaggctgggtggagaacgtcggacaagaaga
gaatcacgccaagaaagcgacgcagaggatgatgatattaaaaagccagcgttgccatct
tctgttgttgctacctccaaagagcgaacacgtcgagaccttatacaagatcaaaatatg
gatgagaaaggaaaacaaaggaatcgacgtatatttggcttgttgatgggcactcttcaa
aaatttaagcaggagtccacagttgctactgagaggcaaaagagacgacaagaaattgaa
caaaaacttgaagtgcaggcagaggaagaaagaaagcaagttgaaaatgaaaggcgagaa
ctatttgaagaaaggcgtgctaaacagacagagctgcggttactggagcaaaaggttgag
cttgctcagttgcaagaagaatggaatgaacataatgctaaaataattaaatatattaga
acgaagacaaaaccccacttattctacatacctggcagaatgtgtcctgctacgcagaag
ttgatggaagagtcacagaaaaagatgaatgcactctttgaaagcaggcgaaatgaattt
gcagagcagattaacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagaa
cagcaggaggtgcagaatgaagaaaagaaagaagaacagaacaaggagcaggaagagggt
aaggtggctcagcaggtggaagagttggagacaggtaatcagcacaatgatgtagaaatg
gaggaggtaggggaggaaaagggaaaaacaggttcagggcatagtgatgcagagaaagaa
caggaagaggatgaacagaaacatgaaatggagattaaagtagaagagactaccgaggtg
agggagaatgacaagcaacaggatggtcagcatgaaaaggtcacagttgtaaaagaggaa
agtgaaagcattcagccagtggataatgagcaggatgtggctgaaatgaatgaggcagat
agtgtagaacctgtagaaaatgaacatggcaaagaagtggaaacagaaacagagtgtgat
gctcagccagaaaaagtgtgtaatgttccttctcccgagaaggagaaaggtatcaaacca
gaaattgaagctgaacctgaagaaaaacaggagaaggcacctgaagctcagccagaacct
gtggctgaggctctatctcagccacagtctgtgccactgccacagtcacctcagttgtct
cagtccactcaggatacagagccccaggcagacaaggatgaaaatgctgtggtgtctgta
aagctggttgaggcacagacagagcagggtcagacaccgagtgtagaaattaagagtaag
actaggagtagaagcaggggtagggcagggaacaaaactggtaagagtcatagccgtagt
agcagcagcagtagtagcagtagtacttcaagcagtactagtagtggaagtagttccacc
actggcagcagtagcagtcggagtagttccacgagcagcagtactacaagtggaagtact
agcagggacagtagcagcagtagctctagtagtagtgaaagtagaagtcgaagccgagga
agagggcataacagagatagaaaacgcagaaggagcacggacaggaagcgaagggatgct
tcaggagtagatagaagtcacaagtcctcaaaaggtgggagcagagataccaaaagctca
aaggataagagttcaagatctgacagaaaaaggtctatatcagaaagtagtcggtcaggc
aagagaacttcacggagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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