Gavia stellata (red-throated loon): 104251332
Help
Entry
104251332 CDS
T08384
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04136
Autophagy - other
gste04140
Autophagy - animal
gste04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104251332 (ATG16L1)
04136 Autophagy - other
104251332 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104251332 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104251332 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
gste03029
]
104251332 (ATG16L1)
Membrane trafficking [BR:
gste04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104251332 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104251332 (ATG16L1)
Mitochondrial biogenesis [BR:
gste03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104251332 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
CFAP251_N
Beta-prop_VPS8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
eIF2A
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR41
ASA1
Tricorn_2nd
CLIP1
CCDC93_CC
CCDC39
INO80F
HEF_HK
ZapB
BEGAIN_coil
Fez1
Nucleo_P87
DUF8181
Tricorn_N
HTH_6
CEP135_N
PUMA_CC
AP5B1_middle
PALB2_WD40
DUF6383
FUSC
V_ATPase_I
Rod_CreS
WHD_CYT4
FKBP15
YabA
Motif
Other DBs
NCBI-GeneID:
104251332
NCBI-ProteinID:
XP_009809769
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDDIE
VLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAARR
RSLSSFPAPQDNVEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRR
VKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQT
FSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSSINAVAW
SPAGAHVVSVDKGNKAVLWSEF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagtccaggacacgatggcacatggaatgatgctcagctg
caggaactggcacagctgaagataaagcatcaagaggagctgacagagctgcataagaaa
cgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcagaaggacaaa
gagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaactggaa
acagagtgccaggagttgcgtagcaaactgcaagatcttgagcgagctaatcagacactg
aaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactgaggaaa
actactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcggaaaatgaaaaggattcaaggagacgacaagccaggctgcagaag
gagctagcagaagctgccaaagaacccctgcctgttgaacccagggatgatgatattgaa
gtgcttgcagatgaaacctctgacacagctgaggagacctctccagtgcgagctgtcagc
cgaacatccagtaagcgactctcccagccagctggaggccttctggactctatcactaat
atctttggtctgtctgagtctccccttttgggacatcaatcttctgatgctgccaggagg
cgttctttgtcctcgttccctgctccccaggataatgtggagccacatccaggtgccagt
aaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggaggtg
aacgcagtgcagttcagccctggctcccggttactagcaacaggaggcatggaccggagg
gttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctctctggtagt
aacgctgggattacaagcatagaatttgatagtgctggttcttacctcttagcggcttca
aatgactttgccagcagaatctggacggttgatgacaatcgattacggcacaccctgaca
ggtcacagcgggaaagttctgtcagccaagttcttgctggacaatgcacgcattgtttca
gggagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgtataaaaaca
gtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgtgtaatgagtgga
cattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaagaactg
gagctgcttggaagaatcacagctctggacctgaactcagagcgaacagagcttttgacc
tgttcccgtgatgatctactaaaaatcattgatctgcgggttagtgctgtcaagcagaca
ttcagcgcccagggattcaaatgtggctctgactggacgagagttgtgttcagccctgac
ggtaactatgtggctgctggttcagctgatggtgccctctacgtttggaatgtgctcact
gggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtcgcgtgg
tcaccagcgggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctgtggtct
gaattttga
DBGET
integrated database retrieval system
