KEGG   Gavia stellata (red-throated loon): 104251422
Entry
104251422         CDS       T08384                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104251422 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gste03009]
    104251422 (WDR43)
Ribosome biogenesis [BR:gste03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104251422 (WDR43)
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_THOC3 WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML DSE1_N Beta-prop_WDR19_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_NOL10_N DUF6235 WD40_like Beta-prop_RIG_1st Beta-prop_WDR41 UTP15_C
Other DBs
NCBI-GeneID: 104251422
NCBI-ProteinID: XP_009813815
LinkDB
Position
Unknown
AA seq 605 aa
MASTKCFQVTHKNFVTLYMEDGPQRKKRKSEVAEVDKQLDILAIGTAVGSILLYSTVKGE
LQSKLDGGHDNRVNCVRWHQDNCCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVTSLCI
SPDGKMLLSAGRTIKLWDLETKEVYRHFTGHATSVSSLMFTTVKPMNENKPFDGITGLYF
LSGAIHDRLLSVWQIRSDRKEKNAVMSFTVTDEPIFIDLTVSEVKEEPVKLAVVCRDGQL
HLFEHILNGYCKKPLTSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNTLQ
PIIEKVSLNTAESHVCLIRDIQKVLSLKTDVALTKVKTPVVNSDTKVLVPGIPGHSTAVK
TPSSGKEKKKNKRKSGETEESIEERLGALDIDTSKVKTPGGLPQTDSFAVLLVQGLESND
AEILNRVLNTRKETVIKNTVARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTLH
ASYLSTLPDLIPQLGMLYQLMESRVKTLQKLSRLHGRLFILVTQVAASETVQDVTEVNQT
AKLVYEDESSEEEGSDDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPEN
ESEEE
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcctccaccaaatgtttccaagtgactcataaaaacttcgttaccttgtacatggag
gatggcccccagaggaaaaaacggaagtctgaagttgcagaagtagacaagcagttagat
atcctggctattggtacagcagttggtagcattttgttgtacagcacagtaaaaggagaa
ttacagagcaagctagatggtggtcatgacaatagagtaaactgtgtgagatggcatcag
gacaactgctgcttatatagctgttcagaggacaaacacattgtggaatggaacacacag
acctgcaaagtaaagtgcaagtggaaaggtgacaatagcagtgtcacctctctatgcatc
agtccagatgggaaaatgctgctgtcagccggtagaactataaaactgtgggacctggag
accaaagaagtctacagacatttcacaggccatgctacatcagtgtcatcactaatgttt
accacagtgaaacctatgaatgaaaataagccctttgatggaattacagggctttatttc
ttgtctggagctatacatgaccgattactgagtgtatggcagatcagatcagataggaaa
gaaaagaatgccgtgatgtctttcacagtaacagatgaaccaatttttattgacctgact
gtatcagaagtcaaagaagagcctgtgaagttagcggttgtgtgcagagatgggcagttg
catttatttgaacatatcttaaatggttattgcaaaaaacccttaacatcaaactgtact
atccagatagcaacacctggaaatgatggggactccacaccaaaaccagtccctattcta
gcagctgcgttttgcacagacaaacagtctctgctgcttgtgtatggaaacaccttacag
cccatcatagagaaagtgtctttgaacaccgctgaatcccacgtatgtttgataagggac
atccagaaagtgttgtcacttaaaacagatgttgctctaacaaaggtaaagacgcctgtt
gtgaactcggacaccaaagttctagtgcctggcattccaggacacagtacagctgtcaaa
actccatcctcgggaaaggagaaaaagaaaaacaagaggaaatcaggagagacagaggag
agcattgaagagcgcctaggggcattggatattgacacgagcaaagtaaaaactccaggt
ggccttccacaaacagatagcttcgcagtacttttggttcagggcttggaaagcaacgac
gcagaaatcttaaatagagtgcttaacacaagaaaggaaactgtaataaagaacacagta
gccagaatgcctatacatgctgtcattccactgctacatgagcttacgaagagattgcag
ggcaacccatacagtgcctcactaatggttcgatggctgaagtctgtttttactctacat
gcatcctacctttccacattgccagaccttattcctcagctgggaatgctataccagtta
atggagagcagagtaaaaactttgcagaagctttcccgtctacatggaagactcttcatt
cttgtcacccaggttgcagcgtcggaaacagttcaggatgtaactgaagttaatcagact
gcaaagctggtatacgaggatgaatcctcagaggaggaaggctcagatgatgagatgatt
gcagataaagactctgatgaaaactgggatgaagatgaagaaaaagaggagcaatctgat
gaacaagacatgactgttgaaaaggaaatcaatggtgattctgatttggaaccagaaaat
gaaagtgaagaagaataa

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