Gavia stellata (red-throated loon): 104251424
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Entry
104251424 CDS
T08384
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104251424 (CTCF)
03036 Chromosome and associated proteins [BR:
gste03036
]
104251424 (CTCF)
Transcription factors [BR:
gste03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104251424 (CTCF)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104251424 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
104251424
NCBI-ProteinID:
XP_009805596
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKA
ATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagtcgaagctattgtggaggagtcggaaacttttattaaggggaaa
gagagaaaaacctatcaaagacgccgtgaaggtggccaggaggacgatgcttgtcatata
ccaccaaaccaagcagacggaggtgaagtagtgcaggatgtcaacagtggtgtgcagatg
gtgatgatggaacagctggatccaactcttcttcaaatgaagactgaagtaatggaaggt
gcagtgcctcaagaaacggaggccacggtggacgacacgcagatcataacgcttcaggtt
gttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagtacctgta
ccagtgactgtacctgttgccaccacatctgtggaagaacttcagggagcttatgaaaat
gaggtttccaaaggaggcctgcaagagggagagcccatgatctgtcacaccctcccttta
ccagaaggcttccaggtagtgaaagtgggtgcgaatggtgaggtggagacactggaacaa
ggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaacaagaagagtaagcttcgctacaccgaggaaggcaaagat
gtggatgtctctgtgtatgacttcgaagaggagcagcaggagggtttgttgtctgaggtc
aatgcagaaaaggtggtgggcaatatgaagccacctaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgcgaactgtgcagttacacttgtccgcgtcgttccaac
ttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccatctctgtggc
agggctttccggacagtcacgttgctgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggttcggcat
cgccgctacaaacatacccatgagaaaccattcaaatgttcaatgtgtgattatgctagc
gtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgcccgttccag
tgcagcttgtgcagctatgccagcagggatacctacaaactgaagaggcacatgaggacc
cactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcagagtggt
accatgaagatgcacattttgcagaagcacacggagaatgtggccaaatttcactgtcct
cactgtgatactgttatagcaagaaagagtgacttgggtgtccatttgcgaaagcagcat
tcctacatcgaacagggcaagaagtgtcgctattgtgatgctgtgtttcatgagcggtat
gccctcatacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgc
gattatgcatgcagacaggagcggcacatggtcatgcacaaacggacccatactggagaa
aagccttatgcctgtagccattgtgataaaaccttccgccagaaacagctcctcgatatg
cacttcaaacgataccatgatcccaactttgtccctgctgcctttgtctgttccaagtgt
ggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctctggcctg
gatggtggggaaggagagaatggaggagagacaaagaagggcaaacgaggccgaaagaga
aagatgcggtctaagaaagaagattcctctgatagtgaggaaaatgctgaaccagatttg
gatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaagtcgag
caagaggctcctgcaccacctcccagtaagaaacgaagaggaagaccaccaggcaaagct
gccacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcggaaacagtagag
gaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcactcctgag
atgattctcagcatgatggaccggtga
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