Gavia stellata (red-throated loon): 104251483
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Entry
104251483 CDS
T08384
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104251483 (SOX6)
Transcription factors [BR:
gste03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104251483 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104251483
NCBI-ProteinID:
XP_009810339
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
EDAALPFVSIRFLCQLLVEVLELVGNFRQLYAAQLASMQVSPGAKMPSTPQPPNTTGALS
PTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKTAEPVKSPTSPTQNLFPASKSSPVTVTN
KSGIPSPLGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQP
HGVDGKLPSMNSMGLNNCRNEKERTRFENLGPQLTGKPNEDGKLGPGVIDLTRPEDAEGS
KAMNGSAAKLQQYYCWPTGGATVAEARVYRDSRGRASSEPHIKRPMNAFMVWAKDERRKI
LQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCI
VDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMT
SDCSSTSASPEPSIPVIQSTYGMKTDSGSLAGNEMINGEDEIEMYEDYEDDPKSDYSSEN
EAHEAVSAN
NT seq
1471 nt
NT seq
+upstream
nt +downstream
nt
agaagatgcagcattgccttttgttagcatacgattcctatgtcagctcctagtagaggt
tctggagctggtgggtaatttccggcaactgtatgcagctcagctggcaagcatgcaagt
ttctcctggagccaaaatgccatctactccacagccaccaaatacgacaggggcactctc
acccactgggatgaaaaatgagaagagagggaccagcccggtaactcaagttaaggatga
agcagcgcagccactgaatctttcagcccgacccaaaacagctgaacctgtcaaatcccc
aacatctccaacacagaacctcttcccagctagtaaaagcagtccagtgacagtgacgaa
caagagtggcatccccagcccgctcggtggatctctgggaagaggatcctctttagatat
cctttccagtcttaattcacctgccctatttggggaccaggacacagtaatgaaagccat
tcaagaggctcgaaaaatgagagagcagatccaaagggagcagcagcagcaacagcagcc
gcatggtgttgatggaaaattgccctccatgaatagcatgggtctaaacaactgcaggaa
tgaaaaggaaagaacaaggtttgaaaatttaggcccacagttaacaggcaaacccaatga
agatggaaaactgggccctggtgtcatcgatcttacaaggccagaagatgcagaaggaag
taaagcaatgaatggctctgcagctaaactacagcagtattattgttggccaacaggagg
tgccactgtggctgaagctcgagtctaccgggattcgcggggccgagccagtagcgaacc
gcacatcaaacgaccaatgaatgctttcatggtttgggcaaaggatgaacgtcgaaaaat
tctccaagccttccctgacatgcacaactccaacattagcaaaatcctaggatctcgctg
gaagtccatgtcaaatcaagagaaacaaccttattatgaagagcaggcacggctaagcaa
aatccacctagaaaagtatcctaattacaaatacaaacctcgaccaaaacgtacctgcat
tgttgatggaaagaaattgcgtattggtgaatacaaacaactgatgaggtctcgaagaca
ggagatgaggcagttttttactgtaggacaacagcctcaaattccaatcaccacgggaac
tggggttgtctatcctggtgctattaccatggcgactaccacgccatcacctcagatgac
atcagattgctcaagcacctctgccagccctgagcccagcatccccgtcattcagagcac
ttatggtatgaagacggacagcggaagccttgctggaaatgaaatgataaatggagagga
tgaaatagaaatgtacgaggactatgaggatgatcccaaatcagactatagtagtgaaaa
cgaagcccatgaggcagtcagtgccaactga
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integrated database retrieval system
