Gavia stellata (red-throated loon): 104251574
Help
Entry
104251574 CDS
T08384
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104251574 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104251574 (PRPF38B)
Spliceosome [BR:
gste03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104251574 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
104251574 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104251574
NCBI-ProteinID:
XP_009818677
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
PKPAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVT
HVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDS
PYIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWF
STLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPR
RSRSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRSSDRTLERRRSRSRD
RYRSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREKDRSRERSKERKSKG
DLEERRHKDDKDDKKHRDDKRDPKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKS
SKHKNESKEKSNKRSRSRSRGRTDSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSK
DHSDKHDRRRSQSTERESQEKQQKNKDETV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
cccaagccggcggcctcaggcaagcagggcaacgtgctgccgctgtgggggaatgagaag
accatgaacctgaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtg
cagctctatgagctcaagacttaccatgaagtggtggacgagatctacttcaaggttacg
cacgttgaaccatgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtgga
ggggtgcgtggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaa
ttatttacgctgaaactcactcgtaagcaagtgatgggccttataactcatacagactct
ccatatattagggctcttggatttatgtatattaggtacacacaaccacctacagatcta
tgggactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgga
ggttgcgttatgaccatcggggagatgcttcgttccttcctcactaagcttgaatggttt
tccacattgtttccaagaattcctgtgccagtccagaaaaccattgatcagcaaattaaa
agcagacctagaaaaatcaagaaagacggcaaggagggaatggaagaaatagaccggcat
gcagaacgtagacgttcaaggtctccaagacgatctatcagtcccaggaggtctcccaga
agatccagaagcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaa
ctagaaagagaaagagaacggcagagattagaacgtgaagctaaggagagagaaaaagaa
aggcggagatctcgaagtagtgatcgcacgctagaacggaggcgaagcagaagcagggac
agatacagaagccgtagtcgaagtcgtgacaggaaaggagatagaagagacagggatagg
gagcgagagaaagaaaatgaacggagtcggaaaaaagagagagattatgataaggaaaga
ggtagtgagagggaaaaagatcgatctagagaaagatcaaaagaaaggaaaagtaagggt
gatctagaagagagaaggcacaaggatgataaggatgacaagaaacaccgggatgacaag
agggatcccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaagcatagg
agtaggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatca
agtaaacataaaaatgaaagtaaagagaagtcaaataaacgaagtagaagcagaagcaga
ggaagaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaa
tctagaaagcgtagcagaagcaaagaacgttcccacaaacatgatcacagtgacagcaag
gaccattcggacaaacacgatcgtcgaaggagccaaagtacagaacgagagagccaagaa
aagcaacagaaaaacaaagatgagactgtgtga
DBGET
integrated database retrieval system