KEGG   Gavia stellata (red-throated loon): 104251574
Entry
104251574         CDS       T08384                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104251574 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gste03041]
    104251574 (PRPF38B)
Spliceosome [BR:gste03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104251574 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    104251574 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 104251574
NCBI-ProteinID: XP_009818677
LinkDB
Position
Unknown
AA seq 510 aa
PKPAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVT
HVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDS
PYIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWF
STLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPR
RSRSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRSSDRTLERRRSRSRD
RYRSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREKDRSRERSKERKSKG
DLEERRHKDDKDDKKHRDDKRDPKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKS
SKHKNESKEKSNKRSRSRSRGRTDSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSK
DHSDKHDRRRSQSTERESQEKQQKNKDETV
NT seq 1533 nt   +upstreamnt  +downstreamnt
cccaagccggcggcctcaggcaagcagggcaacgtgctgccgctgtgggggaatgagaag
accatgaacctgaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtg
cagctctatgagctcaagacttaccatgaagtggtggacgagatctacttcaaggttacg
cacgttgaaccatgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtgga
ggggtgcgtggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaa
ttatttacgctgaaactcactcgtaagcaagtgatgggccttataactcatacagactct
ccatatattagggctcttggatttatgtatattaggtacacacaaccacctacagatcta
tgggactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgga
ggttgcgttatgaccatcggggagatgcttcgttccttcctcactaagcttgaatggttt
tccacattgtttccaagaattcctgtgccagtccagaaaaccattgatcagcaaattaaa
agcagacctagaaaaatcaagaaagacggcaaggagggaatggaagaaatagaccggcat
gcagaacgtagacgttcaaggtctccaagacgatctatcagtcccaggaggtctcccaga
agatccagaagcagaagtcatcatcgggaaggccatggatcatctagttttgatagagaa
ctagaaagagaaagagaacggcagagattagaacgtgaagctaaggagagagaaaaagaa
aggcggagatctcgaagtagtgatcgcacgctagaacggaggcgaagcagaagcagggac
agatacagaagccgtagtcgaagtcgtgacaggaaaggagatagaagagacagggatagg
gagcgagagaaagaaaatgaacggagtcggaaaaaagagagagattatgataaggaaaga
ggtagtgagagggaaaaagatcgatctagagaaagatcaaaagaaaggaaaagtaagggt
gatctagaagagagaaggcacaaggatgataaggatgacaagaaacaccgggatgacaag
agggatcccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaagcatagg
agtaggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatca
agtaaacataaaaatgaaagtaaagagaagtcaaataaacgaagtagaagcagaagcaga
ggaagaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaa
tctagaaagcgtagcagaagcaaagaacgttcccacaaacatgatcacagtgacagcaag
gaccattcggacaaacacgatcgtcgaaggagccaaagtacagaacgagagagccaagaa
aagcaacagaaaaacaaagatgagactgtgtga

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