Gavia stellata (red-throated loon): 104251596
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Entry
104251596 CDS
T08384
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104251596 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104251596 (PRPF38A)
Spliceosome [BR:
gste03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104251596 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
104251596 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104251596
NCBI-ProteinID:
XP_009816879
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLEPLYNDYRKIKSQNRN
GEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPRVSALEEDMDDVESSEE
EEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPRRRSRSPKRRSPSPRRE
RHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagatccagcccgaaaaggacatcatcgtggagttcatcaaaaacgaggacttc
aagtatgtccgaatgcttggtgcgttgtacatgagattgacaggcactgccattgactgc
tacaagtatcttgaaccactgtataatgactatcgaaaaataaaaagtcagaacagaaat
ggggaatttgaactgatgcatgtggatgaatttattgatgaactactccatgaggaacgt
gtatgcgatatcattctgcctcgattacagaaacggtatgttctggaagaagctgagcaa
ctcgagcctcgtgttagtgctttggaagaagacatggatgatgtagaatctagtgaggag
gaggaagaggaagatgaaaagctggagcgagcaccctctcctgaccaccgcagaagaggc
tacagagaccttgataaacctcgcagatctccagctgtgcgatacaggcggagccgcagc
aggtctccaagaaggcgaagccgctctccaaaaagaagaagtccatcgccacgccgggag
aggcatcgcagcaaaagcccaagacgacaccggagcagatccagagagcggcgccacaga
tcaagatctaaatctccagggcatcaccgtagtcacagacacagaagtcattccaaatcc
ccggaaagatctaagaaaagtcacaagaagagtcggcgagggaatgaataa
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