KEGG   Gavia stellata (red-throated loon): 104251667
Entry
104251667         CDS       T08384                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03082  ATP-dependent chromatin remodeling
gste03083  Polycomb repressive complex
gste04110  Cell cycle
gste04330  Notch signaling pathway
gste04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104251667 (HDAC1)
   03083 Polycomb repressive complex
    104251667 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104251667 (HDAC1)
   04350 TGF-beta signaling pathway
    104251667 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104251667 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gste03036]
    104251667 (HDAC1)
Enzymes [BR:gste01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104251667 (HDAC1)
Chromosome and associated proteins [BR:gste03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104251667 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     104251667 (HDAC1)
    BRAF-HDAC complex
     104251667 (HDAC1)
    REST complex
     104251667 (HDAC1)
    SHIP complex
     104251667 (HDAC1)
    MiDAC complex
     104251667 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104251667 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104251667 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    104251667 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104251667
NCBI-ProteinID: XP_009807682
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccataggatccggatgacccacaacctgctgctgaactatggcctctacagg
aagatggagatatatcgccctcacaaggcaaatgcagaagaaatgaccaagtaccacagt
gatgactacataaaatttctgaggtctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagatttaacgttggcgaagactgccctgtgtttgatgggttgtttgagttc
tgtcagctctctgctggaggctcagttgccagtgcggtgaagctgaacaagcaacagaca
gatattgctgtgaattgggcaggaggtcttcaccacgctaagaagtcagaggcttctggc
ttctgttatgtcaacgatattgtcttagctatcttggagctcctaaagtatcaccagaga
gtgctgtatattgacattgatattcaccatggagatggcgtggaggaagccttttatacc
acagaccgcgttatgactgtgtcctttcataagtacggagaatacttcccaggaacaggg
gacctacgggatattggtgcaggcaaaggcaagtactacgctgtcaactatcccctccgg
gatggaattgatgatgagtcctatgaagcaatattcaagccggtgatatctaaagtgatg
gagacgttccagcctagcgcagttgtcttgcagtgcgggtcagattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacgatccgcaacgtggct
agatgctggacctatgagaccgctgtggctttggacactgaaattcccaatgaacttcca
tataatgactattttgagtactttggaccagactttaagctccacatcagtccctcgaac
atgactaaccagaataccaatgagtatctcgagaagatcaagcaacgtctctttgagaat
ctgcgcatgctgcctcatgcccctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgagaaacgcatttcaatccgcaat
tctgataaaagaatatcatgtgatgaagaattctctgactctgaagatgaaggggaagga
gggcgcaaaaatgttgccaactttaagaaagctaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggagaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagacaaaatccacctaa

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