Gavia stellata (red-throated loon): 104251747
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Entry
104251747 CDS
T08384
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104251747 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104251747 (TAF5)
03036 Chromosome and associated proteins [BR:
gste03036
]
104251747 (TAF5)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104251747 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104251747 (TAF5)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104251747 (TAF5)
STAGA complex
104251747 (TAF5)
TFTC complex
104251747 (TAF5)
SAGA complex
104251747 (TAF5)
SLIK complex
104251747 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
104251747
NCBI-ProteinID:
XP_009810490
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
VPPGKVGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPN
APPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITD
DSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGN
CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS
RDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPV
VHLHFTRRNLLLAAGAYSSQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgggaaaagttggaggaggcgttgttgtggaagatcagccagatgtgagtgcg
gtattgtctgcctacaatcaacagggggacccgacactgtacgaggaatactacagtgga
ttaaaacacttcattgagtgttccctggactgtcatcgagcggaattgtctcagctgttt
tatcctctctttgtgcacatgtacttggaattggtctacaatcaacatgagagtgaagca
aagtctttttttgaaagatttcatggggatcaggagtgctattaccaggatgacctgcgt
gtattatctagcttaaccaaaaaagaacatatgaaaggtaacgagaccatgctggatttc
cgaacaagcaagtttgtgctgcgtatttcccgtgactcttaccaactcttgaagaggcat
cttcaggaaaagcagaacaatcagatctggaacattgttcaggaacatctttacattgat
atctttgatggaatgcctcgcagtaaacaacagatagatgctatggtcggaagcttggct
ggggaggcaaaaagagaggctaataaagcaaaggttttctttggcttattgaaagaacca
gagtttgatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaaggaaagcca
aagaagaaaaaacctaaaaaagatagtgtagggtcaaaaagtaaaaaacaagatcctaat
gctcctccccaaaacagaattcctctgcctgaactgaaagactctgacaagctggataaa
gtaatgaatatgaaggaagctgcaaggcgtgtgcgtcttggcccagagtgcctgccctcc
atctgtttctacacgttccttaatgcttaccagggtctgactgcagtggatattacagat
gactctagcatgattgtaggaggctttgctgactctactgtcagagtgtggtctgtgact
ccgaaaaagctacgtagtgtgaaaacagcagcagacctcagtctcattgacaaagaatca
gatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaagattttatat
ggacacagtggacctgtctatggcaccagcttcagtcctgataggaactatctgttgtcc
tgttctgaggatggcactgtcagattgtggagtctccaaacattcacatgtttggtggga
tataaaggacacaactatccagtatgggatacacagttctctccttacggttattatttt
gtgtcagggggacacgacagagtggctcgtctgtgggcaacagatcactaccagccttta
cggatatttgctggccatcttgctgatgtgacatgtacccgatttcatccaaactccaac
tatattgccacgggctcggcagacaggactatacggctctgggatgttttgaatgggaat
tgtgtaagaatattcactggacataagggaccaattcattcactggcattttctcctaat
ggacgattcctggctactggagcaacagatggaagagttctgctgtgggatattggacat
ggcttgatggttggagaactgaaagggcacactgacactatctatgcgctcagattcagt
agagacggggagattttagcatcaggttcaatggataacacagttcgtctgtgggatgct
gtgaaggcatttgaagatttagaaactgatgattttactacagccactggacatataaac
ttgcctgaaaactcacaggacttgctactaggtacatacatgaccaaatcaaccccggtt
gtacacctccattttacacgcagaaacttgctgctggctgcgggagcctacagttcacag
taa
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