Gavia stellata (red-throated loon): 104251869
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Entry
104251869 CDS
T08384
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04140
Autophagy - animal
gste04148
Efferocytosis
gste05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104251869 (VPS18)
04148 Efferocytosis
104251869 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104251869 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104251869 (VPS18)
Membrane trafficking [BR:
gste04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104251869 (VPS18)
Hops complex
104251869 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
DUF2229
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
TMEM249
DUF1664
Lact-deh-memb
KNOX2
Motif
Other DBs
NCBI-GeneID:
104251869
NCBI-ProteinID:
XP_009815112
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
YVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPNQVE
LGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALSRWKGHLIESVGWNKFL
GSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCLEIE
RGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHLPSFREFPASFGFSEIA
FYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPSDIDITVNKPISIVLT
QFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDPTVQQIWIHTEKVVFRYHV
QRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKCYALTQN
YFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILEGDSS
QRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVVA
HHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIPALV
NYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGTNPN
RIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDDEEL
RKKLWLKIACHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNSLED
YNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLFLCG
HMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGKGQQSRE
QIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2834 nt
NT seq
+upstream
nt +downstream
nt
gatatgtgaatgcacgactggagaaggaaacaccaatatttaacaagcaaaggattgatt
ttgctcctccagagaaaattaacagcttagtggtctcctctaaccagctctgtatgagcc
ttggcaaagacacccttctcaggattgatcttggaaagccagatgaacctaatcaggtag
agctgggacgcaaagatgaagccaaagtctacaagatgtttttggaccacacaggctctc
atctcctgattgccctgaacaccagtgaatgcctttacctgaacagaagtgttcagaaag
tgcgagcactctctcgctggaaaggccacttgattgaaagtgtgggctggaacaaatttc
ttggttcagagaccaacactgggcctatcctggtggggacagcccaggggcagatctatg
aggctgaaatctccgtcagcgagggaagccttttcagcactaatcccgaccagtacttcc
gacaggtctacactctggaggaggaatcgggacctgccccagtctgctgcttggagattg
aacgagggatagaagggaaattttttattatagccaccactcgaaagagactcttccagt
ttgttggcaaagtgcctgaagggacagagcagcaaggcttcagctccatatttgctatgc
atgctgaccatttgcccagcttccgggagtttccggccagctttggtttcagtgagatag
ccttttacaccccaaaattgcgctccaacccacgctcctttgcctggatgatgggaaatg
gtgttttatatggtacattggattacagccgtcctgattcaattttgagtgatgaacggg
tctgggtttatccttctgatattgacataactgtgaacaagccaatatccattgtactta
cccagttccacttcctgttgctgctgcctgatcgggtgaaggctgtatgcactctgaatg
ggcaggttgtttttcaagatctgttcctggagaagtttggcttactgacacgcatgatca
aagatcccacagtccagcagatatggatccacactgagaaagtagtattccgctaccacg
tccagcgggaatctagagacgtgtggaagatgtatatgaatatgaacaaatttgatttag
ccaaagagtattgtaaagaccgtccagagtgcctagatattgtgctggcaaaagaggcag
agcactgcttccaaaacaagaggtatctagacagtgccaaatgttatgcgctgacccaga
actactttgaggaaattgcccttaagttcattgaagccaagcaagaagaggccctgatgg
agtttctgattaagaagctaagtaacctaaagccttctgagaagacacagacaactctgc
tgaccacgtggttaacggagctgtacctgaactggctaggtatattggaaggagattcct
cacagcgaaatctctacttggatacacgggagaagtttcgcactttcctgagcagtccta
aaaacaaagactgtctatttaataatcgggcatctatttatgagctgttggcaagccatg
gggacacagagcacatggtctactttgcagtcatcatgcaggactacgagcgcgtagtag
ctcaccactgccagcatgatgagtacgatgaagctctaaatgtgctgtccaggcacagag
acgagaagctgttctacaagttctctccagtcctcatccagcatattcccaagaaggtag
ttgacgcttggatttctatgggatctagactggatgccaggaacctcattccagccctcg
ttaactatagccagagtgccagcacccagcagatcaatgaagccattagatatatggagt
tctgtgtctatcagttggaggaaacccagcaagccattcacaactacctgttgtctcttt
atgctttgtgtcggccggactcgctgctatcatacctggagcaagcaggaaccaacccaa
acaggatccactatgacctgaagtatgcattgcgcctgtgtgcagagcatgggcaccacc
atgcatgtgtccatatttacaaagtgatggaattatatgaggaggctgtggatcttgcct
tacaggtagacgttgatcttgccaagtcctgtgcagatctccctgaagatgatgaggaac
tccggaagaagctctggttgaagattgcttgccatgttgttcaggaagagaaggatgtca
agaaggcaatggcctgcctctccagctgtgcgctgctgaagattgaagacgtcctgccat
tctttccagactttgtcactattgaccatttcaaggaggcaatctgtaactccctggagg
actacaacaagcacattgaggagctgaaaagggagatggaggaagccacacagagtgcca
aaagaatccgagaggacatccaggaaatgagaaacaagtatggctctgtggagcctcagg
aaaaatgtgctgcttgtgactttccgcttctaaaccgccctttttaccttttcctgtgtg
gtcacatgtttcactatgactgtctcctccaagcagttttcccaaaccttcctgcctata
agcaagcaaaacttgaagatcttcagaagaagctggcagctaccagtcagccttccaaga
gccaccatcgtcctaaggacgcagataccattagcttggggaaggggcagcagagccggg
aacagatcaaagctgacattgatgatattgtggcagctgagtgtgtgtactgtggtgagc
tgatgatccgatccattgacaagccttttattgatccccaaaagtatgaagaggagatgc
aaagctggctgtag
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integrated database retrieval system
