Gavia stellata (red-throated loon): 104251915
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Entry
104251915 CDS
T08384
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104251915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104251915
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104251915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104251915
NCBI-ProteinID:
XP_009809041
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
ERPEEEKSSAPPPPGNEEEAAENGVVKTKVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAS
QYGYGAAPVNLNIKTGGRAHGSSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPG
ADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSTTNKITVQQGRTGNLEKELAVQS
TKADFTSPPALFKSGIPTNRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPE
VDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGKYPALHRT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gagagaccagaggaagaaaaatctagtgctccacccccacctggaaatgaagaggaagct
gcagaaaatggcgttgtgaaaacgaaggtggcagaggctgaggatgacagtgatagtgat
agtgatgatgatgaagatgatgttcaagtcaccataggggatattaaaacaggagcttca
cagtatggttatggagcggcacctgtgaatctcaatattaagacaggaggacgagctcat
ggatcttctggtgcaaaagttaaaggggtggatctagatgcaccagggagtattaatggt
gtgccacttctggaagtagatctagattcttttgaagataaaccttggagaaagccaggg
gctgatctctctgattatttcaactatgggttcaatgaagacacctggaaagcttactgt
gaaaaacaaaagagaatacgaatgggtcttgaaattttaccagttacctcaaccacaaat
aaaattacggtacagcagggcagaactggaaatttggagaaagagttggcagtgcagtcg
accaaagctgatttcacatctcctcctgccttattcaaatcaggaattccaacaaacagg
cgattatctggcacaatagatgtgattggacagactatcactatcagcagggtggaagga
cgacggcgtgctaatgaaaacagcaatatacaggttctttcagaacgatctaatcctgaa
gtagacaattttaccaagccacctccatttttccctccaggagctccacctacccacctt
ccaccacctcctttcctcccaccccctccaactgtcagtactgctccacctctgattccc
ccaccaggtaaatatcctgcactacataggacgtga
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