Gavia stellata (red-throated loon): 104252064
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Entry
104252064 CDS
T08384
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104252064 (SNAPC4)
03021 Transcription machinery [BR:
gste03021
]
104252064 (SNAPC4)
Transcription factors [BR:
gste03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104252064 (SNAPC4)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104252064 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SANT_DAMP1_like
SLIDE
GLYCAM-1
Motif
Other DBs
NCBI-GeneID:
104252064
NCBI-ProteinID:
XP_009817704
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
DGEDDDSDSHAEMEVERENDSSDDDMENSLPQDPETCLQMNHVYQEVIQEKIEEVELLIA
QNKEQQKEIMCELGGPKIAKAGDGRNLPANIFLGHFMKPYFKDKTTGIGPPSNEDAKEKA
AQGIKSFEQLISTKWKSREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTEMEKQ
ILEKQIKEVEREIEAINQLPESDLLGNRFDEHDWEKISNIHFDGQRSSEELRKFWQNWEH
PSINKKEWTEEEIERLKKIAAKHDYLDWQTIAQELGTNRTPFQCLQKYQVYNKDLKRKEW
TKGEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGPWTPEED
AMLLTAVKKYGERDWYKIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIELVQ
KHGLGHWSKIASELPHRTGSQCLSKWKLMIGSKKRSRPTKRRHVQESSSSSESSSEDIEL
DLEDSSEEETVSKEECAFPSIDLWIPTRTNAQESDKGRYQTPSLFSPATADAKTSSSEVP
NATCDGDKDRVADKSSELNTLLRGIARPHSTDIVVKNPVEVMDKASRCGKQVLRVTLENV
RRVLRNNTCFQRKLQSKILKPSATVLTKTSGVGTSVGQKLQGLQNITEKTYRQERERLRR
MNLDRKLLMAVTPWVGNVLLPCTLQTGKMAFHQTKADSIQEKIKSVSLMSTPLFTLFIQL
FQIDTNGCMKIIRERRLRQSELLRANARRPQQASQNMETSSGTLSQSCTQRNSRRGIPRN
AVRRPVALKARETSAAVFESSAPAVQGALPAQVQRQKPKTVSELLREKRLRESRAKKAMQ
RTVFVAPQMLVSGPLIIQHPPQQIIPSVQAGSKSAAAGCTNSQVQCAPAPLPAFTSVAGS
TSTAIVLENHSSSVPETGESPAPSQGTELQSNKELKEQALASSPEGGVFPVTNPAAAEKA
PHQGGCNGQVLAGSSASVVLQNQAFVPHQITVVSVGIESGTNKLSLSTPVTCELNSNGPQ
QTQVNLLPALVTPQTASPLIPNSILPFTWVVTPQALLPTAVQTVVGVPQGLPAAAVRSQC
QTTVTSNGNVSGLGVPPVSAGANTPHPSSAETKAPSAQLAEGVPLGKTANLSTILLPVTS
ASPGCTTSSVSSATPACSDGFSKASDSSAAQTALPPDAPTVHAVLLPQTQLPASTQGSDS
QCVLSLTSLGKSHDSVTTNGSSSSPSIITKGIVLQPGDRVRQNNVPRNSGCFAAQALRNR
PIASKPPTTQPADSPPQPTASSAEKNLLDFSLISLEDEGLVKEWLSGKQGVQVPSLQTRL
PYLPPFLCNLKTLSKLLLQKAALEEQAACLLPSDASQDEGTGVDLQAIGELVQQKLGDNP
AYLLLKARFLAAFTLPAVLATLPPPKVTTTLSASRKQCEESDEEEWQSEKEVSEEESCGD
ELTGVRLDWTVGDEPGDKDADLLNQGMGAEENAAQSVLDSCADVADASAPQIRRSARFRK
RRRM
NT seq
4517 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaagatgatgactcagattctcatgctgaaatggaagtggaaagagaaaatg
acagtagcgatgatgatatggaaaatagtctgccacaggatccagaaacatgtctgcaga
tgaaccatgtgtaccaggaagttatccaggaaaaaattgaggaagtcgagcttctcattg
cacaaaacaaagaacagcagaaggaaatcatgtgtgagcttggtggtccaaaaatagcaa
aggcaggagatggtagaaatctaccagcaaatatatttttgggtcattttatgaagccat
actttaaggataaaacaacaggaattggccctccttccaatgaagatgccaaggaaaagg
cagctcagggaataaaatcctttgaacaactcatttcaacaaaatggaaaagcagagaga
agacattattgcagaaatcagtagtaagtgaccgcttgcagcgcttgcttcagccaaagt
tactgaagatgagttattggaatcagaaactggagaaagtcaagactgaaatggagaagc
agatcttggaaaagcaaatcaaagaagtggagcgagaaatagaggcaattaaccaactcc
cagaaagtgacttgttaggaaacagattcgatgagcatgactgggagaaaatttcaaaca
tccactttgacggacaacgtagctcagaagaactgaggaagttctggcaaaattgggagc
atccaagcatcaacaaaaaggaatggactgaggaggaaatagagaggctaaagaagatag
ctgctaaacacgattatctggactggcagactatagctcaggagctggggacaaacagga
cacctttccagtgcttgcagaagtatcaagtctataacaaagatttgaaaaggaaagaat
ggaccaaaggcgaagatcagatgcttttagagcttgttcaagagatgagagtgggaagtc
atatcccatacaagaaaattgcttattacatggaaggaagagattctgctcagctgattt
accgatggacaaagagcgtggaccccagtttgaagaaaggaccctggacaccagaggaag
atgctatgctgttgactgcagttaagaagtacggagagcgtgactggtataaaattcgga
cagaagtgccagggaggagtgatgctcagtgcagagatcggtacttaaaagcattgcact
gtgatgtaaagaaaggcaagtggagtttagaggaagaggagcagctaattgaactggttc
aaaagcatggcctgggtcactggagtaaaatagcttccgaattgccacatcggactggct
cccaatgtctaagcaagtggaaactcatgattgggtctaagaaaagatctaggccaacaa
aacgccgacacgtgcaagaaagttccagctcttcagagagtagcagtgaagacatagaac
tggacttagaagacagttcagaggaggagacagtaagcaaggaggagtgtgcatttccca
gcattgatttgtggataccgacacggacaaatgcgcaggagtcagacaaaggaagatacc
aaactccatcccttttctctcctgcgactgctgatgcaaagaccagtagcagtgaagttc
caaatgcaacatgtgatggagacaaggacagagttgctgataaatcgtcagagttgaaca
ccctcctgaggggcattgcacgtccacattcaacagacatcgttgtgaagaatccagtag
aagtaatggacaaggcttccagatgtggaaagcaagtgctacgggttaccctggagaatg
tgagaagagttttaagaaataacacatgctttcagaggaaacttcaatcaaagatactaa
aaccttctgccaccgttttaacaaaaacatctggagttggtacttctgttggccagaagc
ttcaggggctgcagaacatcacagagaaaacttaccgtcaagagagagagcgtttgagaa
gaatgaaccttgacagaaagcttctaatggcagtgacaccttgggtgggcaatgtactac
tgccttgcaccttgcaaactgggaagatggcttttcatcagacaaaagctgattctattc
aagagaagattaagtcagtcagtctcatgagcactcctctgttcacactgttcattcagc
tctttcagattgataccaatggctgcatgaagattattcgtgagagaaggctaaggcagt
cagagcttcttagggctaacgcaagaaggcctcagcaggcttcccaaaatatggagactt
cttcaggcactttatcacaatcttgtactcagaggaactcccgaaggggcataccaagga
atgctgtcaggagacctgttgccttaaaagcaagggagacttccgccgctgtctttgaga
gcagtgctcctgccgtgcagggagctcttccagctcaagtgcaaaggcagaagcctaaaa
ctgtctcagaattactgagagagaagcggctaagagaatcccgggctaagaaggctatgc
agaggacagtatttgttgctccacagatgctggtttcagggcctctgataatccagcacc
caccacagcaaataattccttctgtacaagcagggagcaaatctgcagcagctggttgta
caaatagccaagtacagtgtgcaccagctccattgccagcatttacttcggttgcaggtt
caacttctactgctattgtgcttgaaaaccattcctcatcagtgccagaaactggggaaa
gccctgctccgtcacaagggacagaactacaatccaataaggagctaaaagagcaagctt
tggcaagtagccctgaaggaggggtttttccagtcacaaatccagctgcagcagagaagg
ccccacatcagggagggtgcaatggtcaggtcctagctggtagctcagcttcagtagtgt
tgcaaaaccaagcttttgtgccacatcagattacagtggtttctgttggcattgagtctg
gcaccaacaaattgtctctttccacaccagttacctgcgagctgaatagtaatgggccgc
aacagacgcaagtcaatctattgcctgctcttgtaactccacaaactgcttcgcctttga
ttcccaacagcatactgcctttcacgtgggtcgtaacgccacaggctttgctccctaccg
ctgtacaaactgtggtgggtgttccccaaggactgccagctgctgctgtgagaagtcagt
gtcagacaactgtgacttccaatggcaatgtctctggcttaggagtgcctcctgtatcag
ctggagcaaatacgcctcaccccagcagtgcagagacaaaagcaccaagtgcccagttag
cagaaggagtacctctgggaaagacagctaacctttccacaattctcttacctgtgacct
cagcgagtcctggatgcaccacatccagcgtttcttctgcaacacctgcatgttcagatg
gcttctccaaggcttctgactcctctgcagctcagactgctcttccacctgatgcaccaa
ccgtgcatgctgtgctgctgccccaaacgcagctacctgcaagcactcaggggtctgatt
cccaatgtgtgttgagtctcactagcttgggaaagagccacgactccgttacaacaaatg
gatcatcttccagtccaagcatcatcacaaaagggattgtgctccagccgggagatcgag
ttcgccaaaacaatgtcccaaggaactctggttgctttgctgcacaagcattaagaaata
gacctattgcctccaaacctccgactacgcagcctgctgacagtccaccccagccaaccg
cttccagtgcagaaaagaatctacttgacttcagcctgatttcccttgaagatgaggggc
tagtgaaggagtggctgagtgggaaacaaggtgtccaggtgccatcactgcaaaccaggt
tgccttatttgccacctttcctgtgcaacttaaaaaccctctcgaagctacttttgcaga
aggcagctctagaagagcaagcggcatgtcttctgccttctgatgccagtcaggatgagg
gcactggggttgatttgcaggctatcggagaactggtgcagcagaaactcggtgataacc
ctgcttacctcttactgaaagccagattcctagcagcctttacactcccagctgtactag
caactctgcctcctccaaaagtgacaacaactctgtcagccagcaggaagcaatgtgaag
agagtgatgaagaggagtggcagagtgagaaggaagtgtctgaggaagagagttgtgggg
atgaattaacaggtgtacggttggattggacagttggtgatgagccaggagacaaagatg
ctgatttactaaatcagggcatgggagctgaagagaatgctgcacagtctgtcttggact
cctgcgctgatgtggctgatgccagtgctcctcaaatcaggagaagtgcccgcttcagga
aaaggaggaggatgtga
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integrated database retrieval system
