Gavia stellata (red-throated loon): 104252484
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Entry
104252484 CDS
T08384
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104252484 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104252484 (TBP)
03021 Transcription machinery [BR:
gste03021
]
104252484 (TBP)
Transcription factors [BR:
gste03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104252484 (TBP)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104252484 (TBP)
RNA polymerase III system
TFIIIB
104252484 (TBP)
RNA polymerase I system
SL1/TIF-1B
104252484 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
104252484
NCBI-ProteinID:
XP_009813340
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcttgccaccctacgctcaaggcttagcctcccctcagggtgca
atgactccaggaattccaatttttagcccgatgatgccatatggcacaggactgacacca
cagcctgtccagagcaccaacagtctgtccatcctagaggaacagcagcggcagcagcag
cagcaacaagcagctcagcaatctacatcacagcaagcgacacagggaacatctggtcaa
actccccagctcttccactcacagactcttaccacagcccctttaccgggaaccacacct
ctctacccctctccaatgactccgatgactccaataactcctgcaacaccggcgtccgag
agctctgggatagtgccacagctacagaatattgtgtccacagtgaatcttggttgcaaa
cttgacctaaaaactattgcgcttcgtgcccgaaatgctgaatataatcccaagcgtttt
gctgctgttattatgagaataagagaaccacgtactactgcacttatattcagctctgga
aaaatggtgtgcacaggagcaaaaagtgaggagcaatccagactggcagcaaggaagtat
gcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaaattcagaac
atggtgggcagctgtgatgtgaaatttcccatcagattagaaggtttggtactcacacac
cagcagttcagcagctatgagccagaattgtttcctggcttaatctacagaatgatcaag
ccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggtgctaaagta
cgagcagaaatctatgaagcatttgaaaacatctatcctattttaaaaggattcagaaag
acaacgtaa
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