Gavia stellata (red-throated loon): 104252738
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Entry
104252738 CDS
T08384
Symbol
POLL
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03410
Base excision repair
gste03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104252738 (POLL)
03450 Non-homologous end-joining
104252738 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104252738 (POLL)
Enzymes [BR:
gste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104252738 (POLL)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104252738 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
104252738 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
PTCB-BRCT
NTP_transf_2
HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
104252738
NCBI-ProteinID:
XP_009810481
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDSGKSVPPKISKEEGTEILDKWLKPVTAYVLQAGIGQARAEI
FHKQIVQNGGVVHNQLSLEVTHVIVAEDMDCDRAFRLLKLTKLPSGLQLVKASWLSACIR
DQKLLSTTGYGVFIPHRYANAMLSFLPTELLSXTEQHXNLTSAQNLALQLRAPPVGMTQK
IQPPADEKAVKPNTEAQKVSDDDDSEGEDATVTQGDLEALISGRYPVKSSEETSDSSSTV
AQPASKWVCAHSSNSKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKP
VTSYQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMW
YQQGFRTLDDIRTKATVTSQQAVGLKHYADFLERMPREEAAEIEQTVRQAALALKPGLVC
VACGSYRRGKPTCGDVDVLVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLVTQEDNGDQKK
YLGVCRLPGPARHHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL
SSAVVRGPGGVKVASGHTLPTPTEKDVFIQLGLPYREPSERDW
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactca
gggaaaagcgtccctccaaagatctcaaaagaggaaggaacagagatacttgacaagtgg
ctgaaaccagtcaccgcctacgtgttgcaagctggcatcggccaagccagggcagagatc
ttccacaagcagattgtccagaatgggggtgttgtacacaaccagctctccttggaggtg
acgcacgtcattgtggctgaagacatggactgtgatcgggcctttcggctccttaaatta
accaagctaccttcaggattgcagctagtgaaggcatcctggctaagtgcttgcattaga
gaccagaagctgctgagtaccactggctacggtgtctttattccgcacaggtatgcaaat
gccatgctgtcattcctccctacagagcttctatcctaaactgaacagcactaaaatttg
acctctgctcaaaatctcgcactgcaactccgtgcacctcctgtgggcatgactcaaaag
atccagcccccagcagacgagaaagcagtgaaaccaaatactgaagcacagaaagtctct
gatgatgacgacagtgaaggagaagatgctactgtcacccagggagatctggaagcattg
atttctggccgctaccctgtgaaatcgtcagaggagaccagtgacagctcttccacagtg
gcccaacctgccagcaagtgggtttgtgcccattcctccaacagcaagaaggagaatcac
aaccagtgcatcacagagaagctggaagtgctggcaaaggcctattctgtccagggggac
aagtggagagctctgggctactccaaagccatcaatgcactcaagagctaccacaaacca
gtcacctcctatcaggaagcctgtaaaatccctgggattgggaagcgaatggcagagaag
atcctggagatcttggagagtgggcatctgcgcaagctggatcacatcagtgagagtgtt
cctgtgctggagttgttttccaacatctggggagcaggggtcaagacagctcagatgtgg
taccagcagggtttccggacgctggatgatatccgcaccaaggcgactgtcaccagccag
caagctgtggggctgaagcactacgcagatttcctggagcgcatgcctcgggaggaagct
gcagaaatagaacagactgtcagacaagctgccctggccctgaagcctgggctcgtgtgt
gtggcatgtggctcctaccgtcgggggaagcccacctgtggagacgtggatgtgctggtc
actcacccagatgggcagtctcaccgtggggtgttcagcaagctgcttgacagcctccac
aggagcggcttccttacggatgacctggtgactcaagaggacaacggtgatcagaagaag
tacctgggggtgtgccgcctccccgggccagcccggcatcaccgccggcttgacatcatc
gtggtgccttacagtgagtttgcctgtgccctgctctacttcaccggctcagctcacttc
aaccgctccatgcgggccctggccaagaccaaaggcatgagcctctcggagcatgccctc
agctcagccgtggtgcgaggccctggaggtgtcaaggtggcatctggccatactctgccc
actcccactgagaaagatgttttcattcagctggggctgccttaccgggagccctcagaa
cgagactggtga
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