Gavia stellata (red-throated loon): 104252783
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Entry
104252783 CDS
T08384
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04512
ECM-receptor interaction
gste04514
Cell adhesion molecule (CAM) interaction
gste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104252783 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
104252783 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104252783 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104252783 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gste04090
]
104252783 (SDC1)
00535 Proteoglycans [BR:
gste00535
]
104252783 (SDC1)
Membrane trafficking [BR:
gste04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104252783 (SDC1)
CD molecules [BR:
gste04090
]
Proteins
104252783 (SDC1)
Proteoglycans [BR:
gste00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104252783 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104252783
NCBI-ProteinID:
XP_009819620
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MLYQQEQYVYTAEANKMRELITLLYLVLSSLDILNSFERRVLRQTGAQTTNLNLPPEDLD
SSGDDDDAFSGSGAGPLTDQSRTWRIPGEPTNSSLLATPMDFNEQPFPGIESRTEKEVIS
PSATSNVVTEEPVVAVKDELPILGSPDEKPTNDADTTTVRSPATHFPSVVHVTPSEASGT
VHELEPKIPSSDVPDTKDLPEPHSTIHHEGDITATPTTTAPKDIVPTHEEISEDGSGDPG
DFILTKDEDLVPTQNSEVQADSGRNAKAAGASGIMDRKEVLGGVIAGGLVGLVFAVFLVA
FMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgttgtaccaacaggaacagtacgtgtatacagcagaggccaacaagatgcgtgaactt
atcactctgctttatttagtgttgtcatctttggatatcctgaacagctttgaacgtcgt
gtgttgcgacaaacaggtgcacaaactacaaatctgaaccttcctcctgaagatctcgat
tcatctggtgatgacgatgatgcgttctcaggttcaggtgcaggtcccctgactgaccag
tctcgcacctggagaatcccaggagaaccaactaattcctcattactggcaacaccaatg
gatttcaatgaacagccatttccggggattgagagccgaactgaaaaggaagtaatatct
ccttctgcaactagtaatgtagtgacagaggagccagttgtagctgtgaaggatgaatta
cccatcctgggctcacctgatgagaaaccaacgaatgatgcggatacaacaacagttaga
agccccgctacccactttccttcagtggttcatgtaactccttcagaagcctcaggcacg
gtccatgagctggaacctaaaatccctagctctgatgtgccagacactaaagacctgcct
gagccccactctaccatccatcatgagggagacatcacagccacccccacgacgacagct
ccaaaggacattgttcctacacatgaggagatttctgaagatggttctggagacccggga
gacttcatcttgactaaagatgaggatttggtgcccacccagaactcagaagtgcaagct
gactctgggaggaatgccaaagcagcaggagcctcgggaattatggacagaaaagaagtt
cttggaggtgttattgctggagggctagtaggcttggtgtttgcagtgtttctagttgca
tttatgctgtacagaatgaagaaaaaagacgaaggaagctattcactggatgaaccaaaa
cagtctaacggaggataccaaaaaccacacaaacaagaagaattctatgcataa
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